Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  408 bits (1048), Expect = e-118
 Identities = 204/300 (68%), Positives = 246/300 (82%)

Query: 12  ERFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSW 71
           +RF+QS FLY FLRD VA++SFA+FV+  + A+ AP+IAP NP+D ++IDIMDAE PP W
Sbjct: 6   KRFRQSYFLYSFLRDPVAVTSFALFVVLAMSALLAPVIAPHNPFDGANIDIMDAETPPLW 65

Query: 72  MEGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRID 131
            +GGN  FLLGTD QGRD+FS ILYG R+SL IG  AV +Q  +GI++GL +GY   R+D
Sbjct: 66  KDGGNPAFLLGTDNQGRDLFSAILYGMRVSLLIGVGAVAMQACIGIMVGLLSGYGSRRLD 125

Query: 132 SFLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVR 191
           + LMR AD+QLSFS+ MVAI + AI + +FG   + Q AV  LV++IG+AEWPQYARTVR
Sbjct: 126 NILMRIADVQLSFSSYMVAIFLGAIVQMTFGVGRYEQVAVPFLVLVIGLAEWPQYARTVR 185

Query: 192 ASVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLG 251
           ASVLAEKKKEYVEAARV+G +  RIM+RHILPN L+P+LVISTVQVANAIMSEAALSFLG
Sbjct: 186 ASVLAEKKKEYVEAARVIGLRPFRIMWRHILPNTLTPVLVISTVQVANAIMSEAALSFLG 245

Query: 252 LGLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKIYK 311
           LG+PV +PSLGSLI  GF Y FSG+WWIT FPG+VL+LLVL INLLGDWLRD  NPK+YK
Sbjct: 246 LGMPVTKPSLGSLIKSGFQYFFSGSWWITLFPGVVLILLVLSINLLGDWLRDFLNPKLYK 305