Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  192 bits (487), Expect = 1e-53
 Identities = 107/320 (33%), Positives = 182/320 (56%), Gaps = 16/320 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60
           MF FL++RL  AL V   +S+++F++    GD    + G   S  + + +R + GLN P 
Sbjct: 1   MFGFLLRRLGIALCVAITVSVISFSLLHLSGDLATAIGGPEASSEQIEQIRVQYGLNKPL 60

Query: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120
           + +Y  ++   V+ DLG S+FF+     +I  +L  TL L   A  I ++ +IPLGV +A
Sbjct: 61  VTQYFEWLADVVRLDLGDSFFFQESVYNLIASRLSITLGLGAMALSIALLIAIPLGVLAA 120

Query: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180
           +   +   ++ ++ + +G ++P F  A+ML+ VFS+ L WLP  G         W     
Sbjct: 121 VKRDTWIDRLALSIAVLGQAMPSFWFALMLIVVFSVTLKWLPVSGNST------WA---- 170

Query: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240
                 H V+P+IAL     P  +RL R+ ML+VL+S+YI+ A+AKGL    + ++HAL+
Sbjct: 171 ------HFVMPAIALGYYATPAIMRLTRAGMLDVLNSDYIRTARAKGLRPATVLFKHALR 224

Query: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300
           N ++PV+ +  V+ G M+  +++ ETVF   G G L  +AI R D P++ A V+ + +I+
Sbjct: 225 NALIPVVALAAVEFGFMLGGSVVIETVFSLQGIGQLAWDAIARDDFPVVQAVVLLIAVIY 284

Query: 301 VVTNTIVDLLYGLINPTVNL 320
           +V   + D+L  L++P + +
Sbjct: 285 IVLTLLADVLNALLDPRIRV 304