Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., ABC transporter permease from Synechocystis sp000284455 PCC 6803

 Score =  175 bits (443), Expect = 2e-48
 Identities = 109/317 (34%), Positives = 178/317 (56%), Gaps = 8/317 (2%)

Query: 5   LVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELV-GQSVSEAERQALRDELGLNDPFII 62
           + KRL  A+I +  ISLV F++     G+PL EL    S+S+  R  LR  LGL+    I
Sbjct: 13  ICKRLAIAVITLLGISLVIFSLLALAPGNPLGELATNPSISQEVRDNLRRSLGLDQALPI 72

Query: 63  KYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSAIH 122
           +Y +++ + +QGDLG S+  + P +++I  +L  TL L+  A LI +  +IPLGV +A++
Sbjct: 73  RYLKWLWSLLQGDLGYSFTSRSPVIDLIGQRLPTTLWLMGTAYLISLAIAIPLGVTAALY 132

Query: 123 PKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPS-YGRGETVNLLGWESGFFT 181
               +  ++   S +G S+P FLT ++ + +FS++L WLP  Y    TV+ +        
Sbjct: 133 RGRWWEPLISGISLMGFSLPTFLTGLLFILIFSVQLRWLPFIYDSTLTVDSMASLG---- 188

Query: 182 LDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALKN 241
              +R L++P   L      + +R VRS  LE L   YI+ A AKGL    +   H LKN
Sbjct: 189 -TQIRQLLMPVGVLVFYQSAVILRFVRSAALEELPQNYIRTAYAKGLGTWGMLKNHLLKN 247

Query: 242 TMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIFV 301
             LP++T+  + + T+    ++TE VF+ PG G L +E+I R DTP++ A      ++ V
Sbjct: 248 ASLPLITLIALDVPTIFTGALVTEQVFRVPGIGALLIESIYRSDTPVVMAVTFLYAVLIV 307

Query: 302 VTNTIVDLLYGLINPTV 318
             +++ DL+Y L++P +
Sbjct: 308 FFSSLADLIYQLVDPRI 324