Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  205 bits (522), Expect = 1e-57
 Identities = 109/321 (33%), Positives = 182/321 (56%), Gaps = 17/321 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQALRDELGLNDP 59
           M +++ +RL Q ++++  IS V F +   +  DP R++ G+S +    + +R++LGLN P
Sbjct: 1   MAAYIARRLLQTVVILLGISFVTFVLLYLIPADPARQIAGRSATAQTVENIREQLGLNLP 60

Query: 60  FIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYS 119
           F  +Y R+VT  VQGD G SY  K     +I  +L A+L L+ GA    ++F + +G+ +
Sbjct: 61  FYEQYLRYVTGLVQGDFGRSYLQKTEVATLIASRLPASLVLMAGAITCELIFGLTMGIVA 120

Query: 120 AIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGF 179
           A+   S     +M  S +G+S P F+  I+L+YVF+++LGW P  G G            
Sbjct: 121 ALRRGSRTDDTLMIASFVGVSAPQFVIGILLLYVFAVKLGWFPIGGYGT----------- 169

Query: 180 FTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHAL 239
                  HLVLPS+ L  +    + R++RS ++EV+  ++I+ A+A G    K+ ++HA+
Sbjct: 170 -----FAHLVLPSVTLGFLGAGWYSRMMRSSLIEVMRQDFIRTARATGAGRAKVLFRHAM 224

Query: 240 KNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLI 299
            N +LPV+ + G+ IG  ++  ++ E+VF WPG G L  +AI RVD P+I    +     
Sbjct: 225 PNAILPVIAMIGIDIGLFMSGIVVVESVFGWPGIGQLAWQAIQRVDIPIIMGVTLVSAFA 284

Query: 300 FVVTNTIVDLLYGLINPTVNL 320
            V+ N + DL+  LI+P + L
Sbjct: 285 IVLGNLLADLITPLIDPRIKL 305