Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  191 bits (485), Expect = 2e-53
 Identities = 99/316 (31%), Positives = 176/316 (55%), Gaps = 16/316 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60
           M  F++ RL +A+I +  +   AF +    GDP + ++G  V +    A R   GL+ P 
Sbjct: 1   MIRFVLVRLMRAVITILAVVTFAFVVLRMSGDPAQVMLGPDVPQDAVDAFRKTWGLDQPI 60

Query: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120
            I+Y  ++ +   GD G S   K  AL ++ +++ ATL+L   A ++ ++  IP GVY+A
Sbjct: 61  WIQYLAYIKSIFTGDFGVSMRDKASALHLVLERVPATLQLTLPALILKLMIGIPAGVYAA 120

Query: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180
           +H +S   + V+  + IG ++P F+  ++L+ +FS+ LG LPS G+              
Sbjct: 121 LHRQSFADRGVITLAIIGFTVPSFVMGLVLVLIFSVLLGVLPSGGQ-------------- 166

Query: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240
             D   H +LP+I ++   + +  R  RS M+EVL   YI+ A AKGL    + + HAL 
Sbjct: 167 --DTWMHGILPTITMSIGGIGILARFSRSAMIEVLGQPYIRTASAKGLKWRDVIWSHALP 224

Query: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300
           N  +P++T+ G  +G+++A  ++ E++F WPG G L + +++  D  ++   ++ +    
Sbjct: 225 NAAVPIVTIVGFMVGSLIAGAVVVESIFSWPGIGRLLIVSVSNRDLAVVQCILLIIAAAM 284

Query: 301 VVTNTIVDLLYGLINP 316
           V++N +VDLLYG ++P
Sbjct: 285 VMSNLVVDLLYGWLDP 300