Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  218 bits (554), Expect = 2e-61
 Identities = 124/332 (37%), Positives = 190/332 (57%), Gaps = 14/332 (4%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQA-LRDELGLND 58
           MF FL+ RL   +     +S++AF+    L GDP+  L G+ V   ER A +  +LG + 
Sbjct: 1   MFRFLLGRLAVLIPTFIGVSIIAFSFIRLLPGDPVALLSGERVMSPERHAEISHQLGFDR 60

Query: 59  PFIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVY 118
           P +++Y  ++   +QGD GTS   K+P ++   +   AT+EL   A +  +V  IP GV 
Sbjct: 61  PIVMQYLDYLWGVLQGDFGTSIVTKKPVIDQFMELFPATVELSLCAIIFAVVVGIPAGVV 120

Query: 119 SAIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESG 178
           +A+   S+F +I+M  + IG S+P+F   ++L+ V S  L W P  GR   +      +G
Sbjct: 121 AAVKRGSIFDQIIMGTALIGFSMPIFWWGLLLIIVVSGILQWTPVSGRISLMFFFPSVTG 180

Query: 179 FFTLDGL------------RHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAK 226
           F  +D L             HL+LP+I L +I L +  R  RS MLEVLS +Y++ A+AK
Sbjct: 181 FMLVDSLLSGQEGAFQSAFNHLILPTIVLGTIPLAVIARQTRSAMLEVLSEDYVRTARAK 240

Query: 227 GLPLNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDT 286
           GL   ++   HAL+N M+PV+T  G+QIG M+A  ILTET+F WPG G   ++++ R D 
Sbjct: 241 GLSTFRVVGIHALRNAMIPVVTTIGLQIGVMLAGAILTETIFSWPGIGKWMVDSVFRRDY 300

Query: 287 PLITAYVIFVGLIFVVTNTIVDLLYGLINPTV 318
            +I   ++ +  + ++ N  VDLLYGLINP +
Sbjct: 301 AVIQGGLLIIAAVIMLVNLAVDLLYGLINPRI 332