Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  194 bits (493), Expect = 2e-54
 Identities = 100/322 (31%), Positives = 184/322 (57%), Gaps = 18/322 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQA---LRDELGL 56
           M  F ++R+ Q +  + V++L+ F I   + G     L       A+ Q    L +E GL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 57  NDPFIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLG 116
           N P + ++  +VT   Q DLGTS+  ++P +++I D++ A+L+L   A +  +V S+PLG
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120

Query: 117 VYSAIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWE 176
             +A+ P S+   + M G+  G+S+P F   +++MY+F+++L WLPS+G G+        
Sbjct: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGD-------- 172

Query: 177 SGFFTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQ 236
                    R+L+LP++ L    L L  R  R+ +L+VL++++I+ A +KG+   K+   
Sbjct: 173 ------GSFRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRW 226

Query: 237 HALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFV 296
           H  +N ++ ++T  G+Q G+++   ++ E +F WPG G L ++++   D P++   ++ +
Sbjct: 227 HVARNALVLIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVI 286

Query: 297 GLIFVVTNTIVDLLYGLINPTV 318
            L F+V NT VDL+Y  I+P +
Sbjct: 287 VLWFLVINTAVDLIYAAIDPRI 308