Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  224 bits (571), Expect = 2e-63
 Identities = 121/322 (37%), Positives = 190/322 (59%), Gaps = 1/322 (0%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVG-QSVSEAERQALRDELGLNDP 59
           M S  + RL QA +++  +SL+ F    ++G+P+  +V  ++ +  +  A    LGL+ P
Sbjct: 3   MISVALGRLGQAFLLLIAMSLIGFIGIHSVGNPVFNVVNIETATPEDIHAATIALGLDQP 62

Query: 60  FIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYS 119
              +Y  F+   V G+ GTSY +  PA E++  KL ATLEL   A LI       LG+ +
Sbjct: 63  IWRQYLAFIGNVVSGNFGTSYIYHLPAFELVMSKLPATLELASIAMLIAAPLGTGLGLLA 122

Query: 120 AIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGF 179
                +LF + ++  S   +SIP F  A+ML+ V +I  GW PS GRG T + LG E  F
Sbjct: 123 GRRSGTLFDRTMVKASVSALSIPSFWLAMMLILVGAILTGWFPSGGRGLTASFLGQEWSF 182

Query: 180 FTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHAL 239
            T +GL HLVLP++ALA   + L  RL RS  +EV + +Y +F +AKGL   +I ++H L
Sbjct: 183 LTANGLWHLVLPALALAIPNIALIARLSRSGTIEVENLDYTRFCRAKGLSARRILFRHTL 242

Query: 240 KNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLI 299
            N  +P++T+ G+Q G M+A+ ++ ET+F WPG G L +++I  +D P++ A +  + + 
Sbjct: 243 PNISVPIVTIIGLQFGGMLAFAVVVETIFSWPGVGKLLIDSIQLLDRPVVMATLTVIAVA 302

Query: 300 FVVTNTIVDLLYGLINPTVNLT 321
           FV  N +VDL Y +++P V L+
Sbjct: 303 FVALNALVDLFYAVLDPRVRLS 324