Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., putative peptide ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  313 bits (803), Expect = 3e-90
 Identities = 152/325 (46%), Positives = 226/325 (69%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60
           M +++++R+ Q+++V+FV+ LVAF++   +GDP+  ++GQ  +  +   LR +LGL+ PF
Sbjct: 1   MLAYIIRRIMQSVLVLFVVGLVAFSMFRFVGDPIENMLGQERTTEDVVRLRADLGLDQPF 60

Query: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120
            ++Y RF+  A QG+ G SY   RP  +++ ++  ATLEL   +  + +V  I LGV +A
Sbjct: 61  PVQYWRFLENAAQGNFGLSYRQGRPVADILIERAPATLELALVSGTLAMVLGIGLGVLTA 120

Query: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180
           I         +M  S IG+S+P FL  I+L+YVFS+ELGWLPS+GRGETV L  W +GF 
Sbjct: 121 IRRDGWLANTIMTASLIGVSLPTFLIGILLIYVFSVELGWLPSFGRGETVMLGQWSTGFL 180

Query: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240
           T  GL  LVLPSI L    + L +RLVRSEMLEVL ++YI+FA+A+GL    +Y++HAL 
Sbjct: 181 TKSGLMSLVLPSITLGLYQMTLIMRLVRSEMLEVLRTDYIRFARARGLGERAVYFRHALV 240

Query: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300
           NTM+PV+T+ G+Q+G+++A+ I+TETVFQWPG G LF+ A+  VD P++ AY++ + ++F
Sbjct: 241 NTMVPVITIIGLQLGSIIAFAIITETVFQWPGVGLLFINAVQFVDIPVMAAYLMLISVLF 300

Query: 301 VVTNTIVDLLYGLINPTVNLTGKGA 325
           V  N IVDLLY LI+P +  +  GA
Sbjct: 301 VGINLIVDLLYFLIDPRLRTSKAGA 325