Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., dipeptide transport system permease protein DppB from Phaeobacter inhibens DSM 17395

 Score =  468 bits (1204), Expect = e-137
 Identities = 227/326 (69%), Positives = 280/326 (85%), Gaps = 1/326 (0%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60
           M ++LVKR++QA+ VMF ISL+ FAIQDNLGDPLRELVGQSVSE  RQ LRDELGLND F
Sbjct: 1   MLAYLVKRVFQAIAVMFAISLIGFAIQDNLGDPLRELVGQSVSEEVRQQLRDELGLNDSF 60

Query: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120
           + +Y RF+  A+QGDLGTSYFFK PAL+VI  KL ATLELV GATLII+  S+PLGVY+A
Sbjct: 61  VTQYVRFLGNALQGDLGTSYFFKEPALDVILKKLPATLELVMGATLIIVGLSVPLGVYTA 120

Query: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLG-WESGF 179
           I P ++ ++++M  S +GIS+PVFLTAI++++VFS+ELGW PSYGRG+ V++ G W++ F
Sbjct: 121 IKPNTILSRLIMGISIVGISVPVFLTAILMIFVFSVELGWFPSYGRGDVVHVFGYWDTNF 180

Query: 180 FTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHAL 239
            T DG  H++LPS+ALASIMLPLF+RL+R+EM+EVL SEY+K+A+AKG+   +IY+ HAL
Sbjct: 181 ATADGWVHILLPSVALASIMLPLFVRLIRAEMMEVLQSEYVKYARAKGIRPYRIYFIHAL 240

Query: 240 KNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLI 299
           KNT+LPV+TVGGVQIGTMVAYTILTETVFQWPG GF+FLEA+NRVDTPLI AY+I VG I
Sbjct: 241 KNTLLPVITVGGVQIGTMVAYTILTETVFQWPGMGFMFLEAVNRVDTPLIVAYLIIVGFI 300

Query: 300 FVVTNTIVDLLYGLINPTVNLTGKGA 325
           FVVTNTIVDL+YGL+NPTVN+   GA
Sbjct: 301 FVVTNTIVDLIYGLVNPTVNIARMGA 326