Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  263 bits (673), Expect = 3e-75
 Identities = 129/316 (40%), Positives = 204/316 (64%)

Query: 3   SFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPFII 62
           +F+++RL     V+  +S + FA    +G+P+  LV      A+       LGL+ P   
Sbjct: 2   TFILRRLLHGAWVLLAVSALVFAALYVVGNPVELLVDPQADPADTARTIAALGLDQPLWR 61

Query: 63  KYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSAIH 122
           +Y  F+  A +GDLGTS+    PAL +I ++L ATLEL   A  + ++  IPLG+++ + 
Sbjct: 62  QYLTFLGNAARGDLGTSFIHGVPALSLILERLPATLELAASALFLALLLGIPLGLWAGLR 121

Query: 123 PKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFFTL 182
           P SL  +++ A S++G ++P F   +ML+ VF+++L WLP  GRGET  +LG     FTL
Sbjct: 122 PTSLAGRLIGAASTLGFALPAFWVGLMLILVFAVQLQWLPPGGRGETREVLGLSLSVFTL 181

Query: 183 DGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALKNT 242
           DG RHL+LP++ LA     L +RLVR+   E L+ +Y++FA+AKGL  +++   H L NT
Sbjct: 182 DGWRHLLLPALNLALYKAALVVRLVRAGSREALAQDYVRFARAKGLTESRVVTGHVLPNT 241

Query: 243 MLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIFVV 302
           ++PV+TV G+++G ++A+ ++TETVF WPG G L ++AIN +D P++ AY++F   +FVV
Sbjct: 242 LIPVVTVLGMELGALIAFAVVTETVFGWPGMGKLLMDAINALDRPVVVAYLLFAAALFVV 301

Query: 303 TNTIVDLLYGLINPTV 318
            N +V+LLYG ++P V
Sbjct: 302 LNLLVELLYGWLDPRV 317