Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., permease protein, ABC-type oligopeptide transporter from Marinobacter adhaerens HP15

 Score =  169 bits (429), Expect = 6e-47
 Identities = 91/320 (28%), Positives = 176/320 (55%), Gaps = 16/320 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60
           M +++++R   AL+V   +S   FA+     DP + + G+   +     +R++ G + P 
Sbjct: 1   MLNYILRRGLMALLVALTVSFGTFALFHFATDPAQTIAGEDAPQEMVDDIREQYGFDRPV 60

Query: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120
            ++Y+ ++ +A+QGD G SYF+K+P +E+I +    T+ L   A  + ++ ++PLG+ +A
Sbjct: 61  SVQYADWLGSALQGDFGQSYFWKQPVVELIQEHAKVTIVLALAALGVTVLIALPLGISAA 120

Query: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180
           + P S   +  ++ +    +IP F   +ML+ +F++     P  G         W     
Sbjct: 121 LKPNSWVDRFALSTAVSAQAIPNFWLGLMLIILFAVTFPIFPVSGDAT------W----- 169

Query: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240
                +H VLP++ L +  +P  +RL R+ +L+VLSS+YI+ A+AKG    ++  Q A++
Sbjct: 170 -----KHYVLPALVLGASSVPAVMRLTRTGLLDVLSSDYIRTARAKGFMGYRLILQQAMR 224

Query: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300
           N +LP+++V  VQ+G  +  +++TE+VF   G G L +E+I   D P + + ++   L F
Sbjct: 225 NALLPIVSVLAVQLGHKLGGSVVTESVFSMNGLGRLAVESIFNSDIPTVQSLILIFVLTF 284

Query: 301 VVTNTIVDLLYGLINPTVNL 320
           V+     DL+   ++P + +
Sbjct: 285 VLLTLAADLINAWLDPRIRM 304