Pairwise Alignments

Query, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Klebsiella michiganensis M5al

 Score =  208 bits (529), Expect = 2e-58
 Identities = 120/336 (35%), Positives = 192/336 (57%), Gaps = 19/336 (5%)

Query: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNL-GDPLRELVGQSVSEAERQA-LRDELGLND 58
           M  F+++RL   +     I+L+ FA    + GDP+  + G+     ER A L  E+GL+ 
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEMGLDK 60

Query: 59  PFIIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVY 118
           P   +Y  ++   + GDLG S   + P  E    +  AT+EL   A +  I+  IP+GV 
Sbjct: 61  PMWQQYVNYIWGVMHGDLGISLKSRIPVWEEFVPRFKATMELGVCAMIFAIIVGIPVGVL 120

Query: 119 SAIHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGR-------GETVN 171
           +A+   S+F    +  +  G S+P+F   +ML+ + S++L   P  GR        +T+ 
Sbjct: 121 AAVKRGSIFDHTSVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRISDTVFLDDTLP 180

Query: 172 LLGW---------ESGFFTLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKF 222
           L G+         E G F +D + H++LP++ L +I L + +R+ RS MLEVL  +YI+ 
Sbjct: 181 LTGFMLIDTAIWGEPGDF-IDAVMHMILPAVVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239

Query: 223 AQAKGLPLNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAIN 282
           A+AKGL   ++   HAL+N MLPV+TV G+Q+GT++A  ILTET+F WPG G   ++A+ 
Sbjct: 240 ARAKGLTRMRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299

Query: 283 RVDTPLITAYVIFVGLIFVVTNTIVDLLYGLINPTV 318
           R D P++   V+ V  + ++ N +VDLLYG++NP +
Sbjct: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRI 335