Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (387), Expect = 1e-41
 Identities = 142/536 (26%), Positives = 232/536 (43%), Gaps = 52/536 (9%)

Query: 3   TMKNKLALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLS-HMVFDPLIRF 61
           +++  +A+AL++A  +  A    + V  +A P   D  +  +  T   S   + + L+ F
Sbjct: 5   SLRASIAIALLSAAATVSAKP--LVVCTEASPEGFDIVQYTTAVTADASAETILERLVAF 62

Query: 62  TQKM-EFEPRLAESWQ-RVDNETMRFTLRKGVKFHSGNDF------TADDVVWTFNRLKE 113
           T    +  P LAESW    D  T  F LRKGVKF + + F       ADDVVW+F R  +
Sbjct: 63  TPSTTDTVPGLAESWDISPDGLTYTFKLRKGVKFQTTDYFKPTREMNADDVVWSFKRQLD 122

Query: 114 SA--------------DFKGIFEPLVSLTKVDDYTIEIKTAGTY-PLIENVATYIFPMDS 158
                           +  G    L  + KVDD T++   A    P + ++A     + S
Sbjct: 123 PKHPWHALSLVGYPYFESMGFQNLLKDVEKVDDSTVKFTLAHPESPFLRDLAMPFTSIYS 182

Query: 159 KFYTGTTADGKNKAEIVKHGNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKG 218
             Y          AE+        +    GTGPF +T   +  ++ ++ NPNYW    KG
Sbjct: 183 AEYADQLLKSNKTAEL--------NSKPIGTGPFILTRYAKDAQVRYKANPNYW----KG 230

Query: 219 NV--DKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITF 276
            V  + L  A+  ++ TR+  L +    +     P+D   IK    + +  M        
Sbjct: 231 KVPSEALIFAITLDNNTRLQKLKANECQVALYPKPDDIANIKADPNLKIDEMESMMTSYL 290

Query: 277 QMNQNSNPALKDVRVRQAIVYAINNEGIVDKVM-KGAATTAAQQSPVGYAGYNENLK-PR 334
            MN  S+  L DVRVRQAI  A + +  +  +  +G AT      P    GY+   K P 
Sbjct: 291 AMN-TSHKYLSDVRVRQAINLAFDKKSYIRALFGEGKATEGVGPYPPTMMGYDTASKSPA 349

Query: 335 FDLNKAKELMKEAGYEKGFNLTMIAPNNRYVNDEKI---AQAASAMLSKIGIKVDLKTMP 391
           +D +KA+ L+KEAG  +G   T+ A N   V +      AQ   + ++K+GIK+D++ M 
Sbjct: 350 YDPDKARALLKEAGVPEGQVFTLFARNGGAVTNPNPMVGAQMLQSDMAKVGIKIDIRIME 409

Query: 392 KAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKL 451
             +          DM+  GW  D  D  N   FLT     +  K   N   + N   +  
Sbjct: 410 WGEMLKRAKNGEHDMVFAGWAGDNGDPDN---FLTPNLSCDAAKNGENYARWCNNAFEDA 466

Query: 452 VNAANEETDLEKRSTMLKKVEEILYNEAAFVPLHFQDPSWAAKNTLD---IAPIIN 504
           +  A + T+  +R+ + K+ +++   E  ++ L +     A +  ++   I+P+ N
Sbjct: 467 ITQARKITEPAERAALYKQAQQVFNQEQPWISLAYPKLFVAMRKDVEGFKISPLTN 522