Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  148 bits (373), Expect = 5e-40
 Identities = 128/497 (25%), Positives = 218/497 (43%), Gaps = 36/497 (7%)

Query: 10  LALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQKMEFEP 69
           L L+AA  +F    + + +    DP  +DPH   +     +   + D L+     + + P
Sbjct: 11  LLLLAANAAFAE--STLRIGIQDDPDVLDPHRSRTYSGRLVYTALCDKLVDVNPDLTYSP 68

Query: 70  RLAESWQ-RVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESADF--KGIFEPLVS 126
           +LA +W    D +T+  TLR+GV +H G  F A  V +  +R +   D   K     + S
Sbjct: 69  QLATAWNWSEDGKTLTMTLREGVTYHDGEPFDAASVKFNLDRARTLPDSLRKSELASVDS 128

Query: 127 LTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFASENI 186
           +  +D  T+ IK      L +  AT +  +  +        G   A     G  FAS  +
Sbjct: 129 VEVIDAKTVAIK------LKQADATLVSQLSDRA-------GMMLAPKAAQGE-FASNPV 174

Query: 187 SGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGVDMI 246
             +GP+    R Q  ++  +R  NYW+K +  + DK+    I + + R+A L SG +D+I
Sbjct: 175 C-SGPYKFVQRVQQDRIVLERFDNYWNKQAY-HFDKVVFLPIPDTSVRLANLRSGDLDII 232

Query: 247 APVSPNDYQRIKDAKGVDLFTMPGTRVITFQMN-----QNSNPALKDVRVRQAIVYAINN 301
             V+P D + +K    + ++  PG   +    N     + ++P  KD RVR+A   +I+ 
Sbjct: 233 ERVAPTDVKTVKGDSKLAIYNTPGLGYMQLMFNIGNGEKANSPMGKDKRVRKAFELSIDR 292

Query: 302 EGIVDKVMKGAATTAAQQSPVGYAGYNENLK-PRFDLNKAKELMKEAGYEKGFNLTMIAP 360
           + I   V +G    +AQ  P     Y++ L  P  D+ K+K L+ +AG +    + +   
Sbjct: 293 DAINQVVFEGLYAPSAQPFPKNSPYYDKELPIPTRDIEKSKALLAQAGVKLPLAVDLKVA 352

Query: 361 NNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSAN 420
           NN     +++ Q   AM  + G KV+L     A    E       + M  W    +   +
Sbjct: 353 NNPIA--QQVGQIIQAMAEEAGFKVNLIATEYATMLSEQASGNFQIGMSAWSGRPDPDGD 410

Query: 421 FTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEAA 480
             +F+T        KG  N G Y NA +D+L+N A    D+ +R  +      +L +E  
Sbjct: 411 IHQFVTC-------KGGQNDGKYCNARLDELLNKARTVNDVAQRQALYNDALRLLADEVP 463

Query: 481 FVPLHFQDPSWAAKNTL 497
              L+F     A +N +
Sbjct: 464 TAYLYFDPRIIAMRNNV 480