Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  239 bits (610), Expect = 2e-67
 Identities = 167/518 (32%), Positives = 255/518 (49%), Gaps = 47/518 (9%)

Query: 12  LIAAGLSFGAMAADITVAYDADPVS-MDPHEQLSGGTLQLSHMVFDPLIRFTQKMEFEPR 70
           L+AAG   G  A D+ + Y ADPVS +DP      G   ++   F+ L+         P 
Sbjct: 14  LLAAG---GVTAQDLRIGY-ADPVSSLDPQLNNYAGDRSVALHAFESLVSRRDDKTL-PG 68

Query: 71  LAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKES----ADFKGIFEPLVS 126
           LA+SW+ VD+ T  F LR  VK+  G   TADD+V++F R +      A + G    + S
Sbjct: 69  LAKSWKVVDDTTWEFALRDDVKWQDGTPLTADDLVFSFERARNVPGSVASYAGAMRTVES 128

Query: 127 LTKVDDYTIEIKT----AGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFA 182
           +   DD+T+ IKT    A   P I+++  YI    +     +      KA I        
Sbjct: 129 IKARDDHTLIIKTRSPNANLLPDIDSI--YIVSRHAGAAASSADYNSGKAMI-------- 178

Query: 183 SENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGG 242
                GTGP+   +   G +  F RN NYW    K   DK+    I   A R AALL+G 
Sbjct: 179 -----GTGPYRFVSFVPGDRTIFARNDNYW--GGKPTWDKVDFRFIANAANRTAALLAGD 231

Query: 243 VDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNP---------------ALK 287
           VD+I  VSP D  R++    V++F   G R +  Q +  + P                L 
Sbjct: 232 VDVIDKVSPTDVARLRKTPNVNVFAYQGLRALIIQPSFRAGPNEFIRDNAGKPLAENPLL 291

Query: 288 DVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKAKELMKE 346
           DVRVR+A+  AIN   I +++M+G  T A Q  P    GYN  +K   +DL +AK+L+ +
Sbjct: 292 DVRVRKALSLAINRPAINERIMQGTVTEANQWMPANTFGYNPQIKNIPYDLKQAKDLLAQ 351

Query: 347 AGYEKGFNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADM 406
           AG+ +GF LT+  P +RY    ++ QA +   ++IG+KV L+ +P A Y  + +K    +
Sbjct: 352 AGFPEGFQLTVHVPGDRYPQAPEVMQAVAQFWTRIGVKVQLEVLPWAVYAGKANKNELAI 411

Query: 407 LMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRST 466
            +I W   T ++A     +  T DS+ G+G  N G+YSN  VDK +  +  E D  +R  
Sbjct: 412 SVIAWGNGTGEAAYALTNILTTVDSSKGQGASNWGHYSNPLVDKALADSTAEFDEARRRK 471

Query: 467 MLKKVEEILYNEAAFVPLHFQDPSWAAKNTLDIAPIIN 504
           +L+   +I+ ++   +PL      WAA+  L + P+++
Sbjct: 472 ILQDSVQIVSDDVGIIPLFHYQNIWAARKGLKVEPLVS 509