Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (386), Expect = 2e-41
 Identities = 138/512 (26%), Positives = 235/512 (45%), Gaps = 47/512 (9%)

Query: 9   ALALIAAGLSFGAMA--ADITVAY--DADPVSMDP-HEQLSGGTLQLSHMVFDPLI-RFT 62
           ++AL++   SF  +A  AD T+ Y  D++P ++ P H  L  G + L  +++D L+ R  
Sbjct: 9   SIALLSLFSSFSVLAGKADDTLVYASDSEPENISPYHNDLREGVI-LGRLIWDNLVYRNP 67

Query: 63  QKMEFEPRLAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESADFKGI-- 120
              E++P LA SW++VD+ T+ F LR+GVKFH+G+ FTADDVV+T N +  S + K +  
Sbjct: 68  DNGEYQPMLATSWKQVDDTTIDFQLRQGVKFHNGDPFTADDVVFTLNYV-VSPESKVVTV 126

Query: 121 --FEPLVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHG 178
              + + S  K+ DY++ +     +P      +   PM  K Y              + G
Sbjct: 127 QNVDWIKSAEKLGDYSVRLHLKKPFPPALEYLSNAVPMFPKKY------------FEEVG 174

Query: 179 NSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKG--NVDKLTLAVIKEDATRVA 236
            +  S    GTGP+ VTA   G  ++  +NP+Y+  + +G   +  +   VI +  TR+A
Sbjct: 175 LAGFSRKPIGTGPYKVTAIATGEGVKMDKNPDYFKDSPQGQPKIGHINFRVIADAETRLA 234

Query: 237 ALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQM-----NQNSNPALKDVRV 291
            L++GGVD    V+P+  + +K    + + T   T  I F +       +++  +K ++V
Sbjct: 235 ELMTGGVDWTWRVAPDQAENLKAMPNL-VVTSGATMRIGFLILDARGTSSADSPMKHLKV 293

Query: 292 RQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP--RFDLNKAKELMKEAGY 349
           RQAI YAIN +G+  +++ G +         G  G +        +D  KAK L+ EAGY
Sbjct: 294 RQAINYAINRDGLASQLVGGESKPLQVACYPGQFGCDTTAATVYNYDPAKAKALLAEAGY 353

Query: 350 EKGFNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMI 409
             GF   + A       D    +A    L  +GI   L+ +  A    +       M   
Sbjct: 354 PNGFETEIFA-----YRDRDYVEAIIGNLRAVGINAKLRYLKYAALRDQQRGGKVPMSFQ 408

Query: 410 GWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLK 469
            W        +F+   T        KG  +     + +V   +  A+   D + R    +
Sbjct: 409 AW-------GSFSILDTSASAGTWFKGNPD-DNIKDPQVQGWLQTADNALDPQVRKDNYR 460

Query: 470 KVEEILYNEAAFVPLHFQDPSWAAKNTLDIAP 501
           K  + +  +A + PL     ++A  + L+  P
Sbjct: 461 KALQRISEQAYWAPLFNYSMNYAYVSDLNFKP 492