Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  162 bits (409), Expect = 3e-44
 Identities = 134/486 (27%), Positives = 232/486 (47%), Gaps = 48/486 (9%)

Query: 13  IAAGLSF----GAMAADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQKMEFE 68
           +AAGL+      + A  ITVA  ++P ++DP  +  GG  Q++  +++ L+  T   +  
Sbjct: 8   LAAGLAVLFASTSWAQSITVAIGSEPSTLDPQLRDDGGERQVNDNIYEALMARTATGDLV 67

Query: 69  PRLA-ESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESA---DFKGIFEPL 124
           P LA ++  +VD  T +F LR+G+KFH+G  F AD VV +  R+ + A   +      PL
Sbjct: 68  PGLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRVIDPANNSEQMAYLGPL 127

Query: 125 VSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFASE 184
               KVDD  + I T+   P++     ++  + + +    TA                +E
Sbjct: 128 SGAEKVDDLAVRIITSAPDPILPARMYWLKMVPAAYSKNATA---------------IAE 172

Query: 185 NISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGVD 244
              GTGP+     ++G  +    N +YW    +  +D +T   + E  TR++ L++G  D
Sbjct: 173 KPVGTGPYKFGTWDRGNSITMTANTDYW--GGEPQIDDVTYRFVSEAGTRLSGLVAGEFD 230

Query: 245 MIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPALKDVRVRQAIVYAINNEGI 304
           ++  + P     +  AK V       T VI   ++   NPA+KDVRVR+A+  AI+   +
Sbjct: 231 VVVNLLPEFADSVPQAKSVSGLE---TSVIILGVD---NPAVKDVRVRRALNMAIDRHAL 284

Query: 305 VDKVMKG-AATTAAQQSPVGYAGYNENLKP-RFDLNKAKELMKEAGYEKGFNLTMIAPNN 362
            + +  G A  T  Q    G  GYNE+L+   +D   AK+L+ EAG   G  + ++    
Sbjct: 285 AESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAEAG-AAGTTIDLVGEAG 343

Query: 363 RYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFT 422
           R++ D ++ +A +A  +++G+KV+++ +       EF      +  +G  PD+    N  
Sbjct: 344 RWLKDRELIEAVAAYWTEVGLKVNVEIL-------EFSVYLDRIFDMGNRPDSYFVLNSN 396

Query: 423 EFLTMTRDS----NTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNE 478
           E     R+       G+G  +    S+  + + + AA  E D EKR      + + L++E
Sbjct: 397 ELFDADREMAFAYEPGQGGAS---NSDKALGEAIRAARSEVDGEKRKAAYAVITKKLHDE 453

Query: 479 AAFVPL 484
           A  VPL
Sbjct: 454 AYDVPL 459