Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  155 bits (391), Expect = 4e-42
 Identities = 134/476 (28%), Positives = 220/476 (46%), Gaps = 49/476 (10%)

Query: 21  AMAADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQKMEFEPRLA-ESWQRVD 79
           A A  IT+A  ++P ++DP  +  GG  Q++  +++ L+  T   E  P LA +  ++VD
Sbjct: 24  AWAQSITIAIGSEPSTLDPQLRDDGGERQVNDNIYETLMARTPTGELVPGLAAQPPKQVD 83

Query: 80  NETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESA---DFKGIFEPLVSLTKVDDYTIE 136
             T +F LR GVKFH+G  F AD VV + +R+ + A   +    F  + +  KVDD T+ 
Sbjct: 84  ATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMAYFGTIKTAEKVDDLTVN 143

Query: 137 IKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFASENISGTGPFTVTA 196
           + T G  P++ +   ++         G   DG      V            GTGP+   +
Sbjct: 144 LVTTGPDPILPSRMYWM----KMIAPGYAKDGDLAGAPV------------GTGPYKFDS 187

Query: 197 REQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQR 256
             +G  L+   N +YW    +  +D +T   + E  TR++ LLSG  D+I  + P     
Sbjct: 188 WNRGTDLKLVANADYW--GGEPQIDDVTYRFVTEPGTRLSGLLSGEFDVITNLLPEFTTN 245

Query: 257 IKDAKGVDLFTMPGTRVITFQMNQNSNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTA 316
           +     V     PG     F +    N   KD +VR+A+  AI+ + + + +  G AT A
Sbjct: 246 VPKFAAV-----PGLETSVFVLG-TDNEVTKDPKVREALNLAIDRKAMAEGLFMGYATLA 299

Query: 317 --AQQSPVGYAGYNENLKP-RFDLNKAKELMKEAGYEKGFNLTMIAPNNRYVNDEKIAQA 373
             +  +P  + G+NE L+    D+ KA+ L+KEAG E G  L ++  + R++ D +  +A
Sbjct: 300 KGSHINPAAF-GFNEKLEHYPHDIEKARALIKEAGAE-GKPLVVVGESGRWLKDREQIEA 357

Query: 374 ASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSN- 432
            +   ++ G+ V       +QY    D    D    G  PD    AN  E L   R+ + 
Sbjct: 358 VAGYWAETGLNVTTDIQEFSQY---LDSLMGD----GPRPDAIFIANSNELLDADREMSF 410

Query: 433 ----TGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEAAFVPL 484
                G    N    S+AE+  ++ AA  ETD  KR  +   +++  ++    VPL
Sbjct: 411 IYHKDGAAASN----SDAEMATMIEAARVETDAAKRKALYDDIQKKGHDLNYTVPL 462