Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  169 bits (428), Expect = 2e-46
 Identities = 134/501 (26%), Positives = 229/501 (45%), Gaps = 42/501 (8%)

Query: 8   LALALIAAGLSFGAMAADITVAYDADPVSMDP-HEQLSGGTLQLSHMVFDPLIRFTQKME 66
           +++ L +A  +      ++ +A     +++DP +  L+  T  LSH +++ L+     +E
Sbjct: 17  ISIFLGSAPATLAQERGELRIATSYKLMTLDPQYANLNENTSLLSH-IYERLVYQDDNLE 75

Query: 67  FEPRLAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKE-----SADFKGIF 121
            +P LA SW+ + +    F LR  V+FH G+ F ADDVV+T  R+++     S  F+   
Sbjct: 76  LKPGLATSWRPLSDTQWAFKLRDKVRFHDGSAFDADDVVYTIERIRDFLKPPSGGFRSYV 135

Query: 122 EPLVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSF 181
             + S++  D  T+ I+T G  P +    + +F M+       T +  N           
Sbjct: 136 SGIKSVSAPDPLTVLIETDGAVPNLPLFFSSLFVMNRPSKGFETTENLN----------- 184

Query: 182 ASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSG 241
           A    +GTGP+   +   G  L   RN +YW    K    K+T  VI+  A RVAAL +G
Sbjct: 185 AGHPPNGTGPYRFESWSSGESLRLARNDDYW--GGKPAWSKVTFRVIENPAARVAALSTG 242

Query: 242 GVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRV--ITFQMNQNSNPAL------------K 287
            VD+   +   D   +K  +G  + ++   RV  + F + +++ P +            K
Sbjct: 243 EVDVAHAIPARDVASLKQ-RGAKIASVGAARVNFVQFDVARDTLPGVTDKSGEPIANPFK 301

Query: 288 DVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKPRF-DLNKAKELMKE 346
           +  VR+A+  A +   +VDK++ G  T AAQ  P G  G + NL P   + ++AK L+ +
Sbjct: 302 NPLVRRALTLATDRGILVDKILAGYGTAAAQVFPNGLPGTSANLLPEAPNYDEAKMLLAK 361

Query: 347 AGYEKGFNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADM 406
           AG+  GFNL +  P  RY  D +  QA +   ++IG+       P + +     + A D 
Sbjct: 362 AGFPDGFNLVLAGPAGRYPGDAESLQAVAQSWARIGVNAQPAAAPFSVF--NTKRAAGDY 419

Query: 407 LMIGWHPDTEDSA--NFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKR 464
            +  W+  T   A       L  + D   G G  N G Y N   D ++  A       +R
Sbjct: 420 GV--WYGGTSGEAVDIILHSLLASPDPERGTGALNFGKYRNEAFDAMLAGAESIAVGPER 477

Query: 465 STMLKKVEEILYNEAAFVPLH 485
           +  L +  E++  +   +PL+
Sbjct: 478 NAALAQATELVMADQPIIPLY 498