Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  201 bits (512), Expect = 4e-56
 Identities = 150/506 (29%), Positives = 246/506 (48%), Gaps = 46/506 (9%)

Query: 4   MKNKLALALIAAGLSFGAMAAD----------ITVAYDADPVSMDPHEQLSGGTLQLSHM 53
           MK     A+  A L+F   AA           + V   A+P S+DPH   +    ++   
Sbjct: 1   MKRLFRSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVN 60

Query: 54  VFDPLIRFTQ-KMEFEPRLAESWQRVDN-ETMRFTLRKGVKFHSGNDFTADDVVWTFNR- 110
           V+D L+RF    +E EP LAESW+  D+ +T  FTLR+GVKFH G++F A+ V + F+R 
Sbjct: 61  VYDGLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRM 120

Query: 111 LKESADFKGI--------FEPLVSLTKVDDYTIEIKTAGTY-PLIENVATYIFPMDSKFY 161
           LK+   F           F  + ++  +D++T+E K +  + P + N+A         + 
Sbjct: 121 LKKDHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLA---------YP 171

Query: 162 TGTTADGKNKAEIVKHGNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVD 221
           TG      +   + KHG  +   + SGTGPF         ++  +RNP+YWD A+K  + 
Sbjct: 172 TGLIV---SPVAVEKHGKEYG-RSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAK--LQ 225

Query: 222 KLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQN 281
            +    I +  TRVA +++GG+D++  V P++    +      +    G  V    +N  
Sbjct: 226 AVVFRPITDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTK 285

Query: 282 SNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKA 340
             P   D RVRQA  YA+N + +VD V++G AT AA   P  +     +++P   D  KA
Sbjct: 286 QGP-FADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKA 344

Query: 341 KELMKEAGYEKGFNLTMIAPNNRYVNDE-KIAQAASAMLSKIGIKVDLKTMPKAQYWPEF 399
           K L+ EAG E       +      + D   +  A  A L  +G KV ++T     +    
Sbjct: 345 KALLAEAGVENPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRV 404

Query: 400 D---KCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAAN 456
           +   +  ADM  + W  +  D+     +LT+  D+   KG +N GYYSN ++D+L+  A 
Sbjct: 405 NPGLEGKADMAEMAWMTNDPDTV---PYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKAR 461

Query: 457 EETDLEKRSTMLKKVEEILYNEAAFV 482
             TD  +R  +  +V+ I++++A ++
Sbjct: 462 RSTDQAERGKLYGEVQSIVHDDAPWL 487