Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum GMI1000

 Score =  261 bits (666), Expect = 6e-74
 Identities = 172/515 (33%), Positives = 258/515 (50%), Gaps = 36/515 (6%)

Query: 8   LALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQKMEF 67
           LA+AL  A  +     + + V    D  S+DPH         ++  +F+ L+    KM  
Sbjct: 18  LAMALAPAA-AHAQPPSTLVVGLSGDITSLDPHFHNVTPNANVAEHLFETLVAKDDKMRM 76

Query: 68  EPRLAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNR---LKESADFKGIF-EP 123
            P LA SW+ V +      LR GV+FH G++FT+ DVV++  R   +K S     I+   
Sbjct: 77  RPGLAISWRAVSDTVWELKLRPGVQFHDGSEFTSADVVYSLARPATIKNSPSPYTIYTRG 136

Query: 124 LVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFAS 183
              +T +D  T+ I T G YPL+ N  + ++ +  K       D  N             
Sbjct: 137 FKDVTALDKLTVRITTNGPYPLVPNDLSTLYIVSKKAAEKAGPDDFNNGRA--------- 187

Query: 184 ENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGV 243
             + GTGP+   +  +G +LE  RN  YW K  K   D++TL ++  DA+RVAALL+G V
Sbjct: 188 --LIGTGPYKFVSFTKGDRLELARNDAYWGK--KPQWDRVTLRILTADASRVAALLAGDV 243

Query: 244 DMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQN----------------SNPALK 287
            +I  V P D +R+     V +F MP  R++   M+                   NP LK
Sbjct: 244 QVIESVPPPDIKRLAANPAVSVFKMPAFRLMYLHMDSAREVSPFVTDKAGRPLAKNP-LK 302

Query: 288 DVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLK-PRFDLNKAKELMKE 346
           DVRVRQAI  AI+ + I D VM+GAA    Q       G+   LK P  D+  AK L+ +
Sbjct: 303 DVRVRQAISLAISRQAIADHVMEGAAEPTGQLINSTLFGHVPGLKAPVADVAAAKTLLAQ 362

Query: 347 AGYEKGFNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADM 406
           AGY  GF +T+ A NNRYVND ++AQA ++ML+++GI   ++TMP A ++   +K     
Sbjct: 363 AGYPDGFGITLHATNNRYVNDHRVAQAIASMLTRVGIATRVETMPSATFFMRANKLEFSF 422

Query: 407 LMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRST 466
           L+ GW  DT ++++  + L  T D   G G  N G YS+  +D  +  A +  D  +R  
Sbjct: 423 LLAGWGADTGEASSCLKALLATYDPARGWGASNRGRYSSPALDAKLAEALQTLDDARREK 482

Query: 467 MLKKVEEILYNEAAFVPLHFQDPSWAAKNTLDIAP 501
           +L++  EI   E   +PL+F   +WAA+    + P
Sbjct: 483 LLQEATEIGMREVGVIPLYFNINAWAARKGYTVVP 517