Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., putative extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score =  285 bits (728), Expect = 4e-81
 Identities = 180/525 (34%), Positives = 272/525 (51%), Gaps = 24/525 (4%)

Query: 4   MKNKLALALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQ 63
           +K+ L  ++  AG    A A  +  A   D +++DPH Q  G T+ L   + +PL+    
Sbjct: 3   LKSLLLTSVFYAGAVCSAEAETLKWARAGDALTLDPHAQNEGPTITLGRQIMEPLVDRDM 62

Query: 64  KMEFEPRLAESWQ--RVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNR-LKESADFKGI 120
           K    P L+  W+    D     FTLR GVKFH G DF ++DVV++ NR + E ++++ +
Sbjct: 63  KGGLVPGLSTEWRPSESDPNVWTFTLRDGVKFHDGADFDSEDVVFSINRAMTEKSNYREV 122

Query: 121 FEPLVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNS 180
              +  +     Y +EI T G  P++ N  T +  MD  +      D  +  +     ++
Sbjct: 123 LASVAEVRATGPYRVEIVTKGPNPIMPNNLTNLLIMDKGWAEAN--DAVDVQDYEGGEST 180

Query: 181 FASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKG-NVDKLTLAVIKEDATRVAALL 239
           +A++N +GTGP+ V +RE  VK   +R   YW        V ++  + I+  ATRVAALL
Sbjct: 181 YAAKNANGTGPYKVVSREPDVKTVLERFDGYWGLGQFPLQVTRIEASPIQNPATRVAALL 240

Query: 240 SGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNS-----------NPALKD 288
           SG VD I  V   D  R+  ++G+D+   P  RVI F MNQ             NP L D
Sbjct: 241 SGEVDFIQDVPVQDLSRVDGSEGLDVRKAPQNRVIFFGMNQGDADLANDNVDGRNP-LSD 299

Query: 289 VRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLK--PRFDLNKAKELMKE 346
           VRVRQA+  AIN E I   VM+G +  A    P    G+   L   P  D+  AK LM+E
Sbjct: 300 VRVRQAMNMAINREAIQKIVMRGQSEPAGVALPPFVNGWTAELDKVPATDIAAAKALMEE 359

Query: 347 AGYEKGFNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADM 406
           AGY  GF++ +  PN+RY+NDE I QA+  M ++IGI V+L   PKAQ++P  +   +D 
Sbjct: 360 AGYGDGFSIKLDCPNDRYINDEAICQASVGMFAQIGINVNLDAKPKAQHFPLINNLESDF 419

Query: 407 LMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRST 466
            M+GW   T DS     FL  ++      G +N   YSNAE+DK + A   ET++  R+ 
Sbjct: 420 YMLGWGVPTYDSEYIFNFLVHSK--GEAYGSWNSTRYSNAELDKAIEALASETNIAARNE 477

Query: 467 MLKKVEEILYNEAAFVPLHFQDPSWAAKNTLDIAPIINGMDFPYF 511
            +  + + +  +  ++P+H Q  +W  K+ +D   I++  D P F
Sbjct: 478 SIGAIWDQVQEDVLYLPIHHQVLNWGMKSHVD--AIVDPEDSPKF 520