Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP) from Phaeobacter inhibens DSM 17395

 Score =  669 bits (1725), Expect = 0.0
 Identities = 328/517 (63%), Positives = 398/517 (76%), Gaps = 1/517 (0%)

Query: 1   MKTMKNKLALALIAAGLSFGAMA-ADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLI 59
           MK   + LA+A + A LS  AMA   I VAYDADPVS+DPHEQLSGGTLQLSHMVFDPL+
Sbjct: 1   MKHFASTLAVATLTATLSTAAMAEVTIKVAYDADPVSLDPHEQLSGGTLQLSHMVFDPLV 60

Query: 60  RFTQKMEFEPRLAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESADFKG 119
           R+T+ ++F PRLAESW+++D  TMRF LR GV FHSGN  T+ DV WTF+RLK S DFKG
Sbjct: 61  RWTKDLQFAPRLAESWEQIDETTMRFKLRDGVTFHSGNALTSADVDWTFDRLKASPDFKG 120

Query: 120 IFEPLVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGN 179
           IF P   +  VD+ T ++KT+  YPLI + ATYIFPMDS+FY+GTT DGK KAE+VKHG+
Sbjct: 121 IFAPFTDVEVVDELTFDLKTSEPYPLILHTATYIFPMDSQFYSGTTEDGKEKAELVKHGD 180

Query: 180 SFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALL 239
           SFAS N+SGTGPFTVT REQGVK+ F R  +YWD AS+GNVDK+ L  IKED TRVAALL
Sbjct: 181 SFASRNLSGTGPFTVTEREQGVKVVFDRFDSYWDTASEGNVDKIILTPIKEDPTRVAALL 240

Query: 240 SGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPALKDVRVRQAIVYAI 299
           +G VD IAPV P D +R+++  G  L T PGTR+ITFQ+NQN   A KD RVR+AI YA+
Sbjct: 241 AGDVDFIAPVPPTDLKRVEEHDGTTLITEPGTRIITFQLNQNRVEAFKDARVRKAIDYAV 300

Query: 300 NNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKPRFDLNKAKELMKEAGYEKGFNLTMIA 359
           NN GIVD++M+G  T  AQ SP GY GY+E+L PRFD+ KAK LM EAGY  GF++TM+A
Sbjct: 301 NNAGIVDRIMRGFGTVGAQASPAGYLGYDESLTPRFDVEKAKALMAEAGYADGFSVTMMA 360

Query: 360 PNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSA 419
           PNNRYVND+KIAQA ++ML+KI IKVDL+TMPKAQYWP FD+ AADM+MIGWH DTEDSA
Sbjct: 361 PNNRYVNDDKIAQAVASMLAKINIKVDLQTMPKAQYWPTFDERAADMMMIGWHADTEDSA 420

Query: 420 NFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEA 479
           NF +FLT   D  TG GQYN G Y N E D L+  AN  TD  KR  +L+K+E ILY +A
Sbjct: 421 NFHQFLTHCPDETTGNGQYNSGNYCNPEADALMAEANATTDQTKRGELLRKLEGILYADA 480

Query: 480 AFVPLHFQDPSWAAKNTLDIAPIINGMDFPYFGDLVV 516
           AF+PLH+Q+ +W A++ +    I+N ++FPYFGDL V
Sbjct: 481 AFIPLHWQNLAWGARDGVHAEKIVNALNFPYFGDLKV 517