Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., Periplasmic dipeptide transport protein from Enterobacter sp. TBS_079

 Score =  166 bits (420), Expect = 2e-45
 Identities = 156/543 (28%), Positives = 243/543 (44%), Gaps = 52/543 (9%)

Query: 1   MKTMKNKLALAL---IAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHMV-FD 56
           M T K  LALAL   + AG ++ A    I    +A P S +P    SG +   S  V ++
Sbjct: 1   MSTGKTLLALALSTLLPAGAAWAANNDTIIYCSEASPESFNPQIASSGPSFVASSQVLYN 60

Query: 57  PLIRFTQ-KMEFEPRLAESWQ-RVDNETMRFTLRKGVKFHSGN------DFTADDVVWTF 108
            LI F   K    P LAESW    D +T  FTLRKGVKF+S        DF ADDV+++ 
Sbjct: 61  RLINFDPVKNTPVPSLAESWTISPDGKTYTFTLRKGVKFNSNKYFKPTRDFNADDVIFSV 120

Query: 109 NRLK--------------ESADFKGIFEPLVSLTKVDDYTIEIKTAGTYPLIENVATYIF 154
            R K              E  +  G+ + +  + KVDDY ++      + L E  A ++ 
Sbjct: 121 MRQKDPKHPYHNVSQGNYEYFNDVGLDKLIQDVKKVDDYHVQ------FTLSEPNAAFLA 174

Query: 155 PMDSKFYTGTTADGKNKAEIVKHGNSFASENIS----GTGPFTVTAREQGVKLEFQRNPN 210
                F +  +A+  +   ++K G     EN+     GTGP+ +   +    + +  NPN
Sbjct: 175 DWGMDFASILSAEYADA--MLKKGTP---ENVDTWPIGTGPYVLQQYKVDSLIRYVANPN 229

Query: 211 YWDKASKGNVDKLTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPG 270
           YW+ A       L  ++     TR+A L +    +I   SP  +  I   K + L  +  
Sbjct: 230 YWEGAVP--TKHLIFSITPNVETRLAKLQTNECQIIPAPSPVQFDVINKNKDLKLHAVEA 287

Query: 271 TRVITFQMNQNSNPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNEN 330
             V     N    P   +V VRQA+ YA + + IV+ V  G+ T A    P    G+N +
Sbjct: 288 LNVGYLAFNTEKKP-FDNVLVRQALNYATDKKAIVNAVFMGSGTVAKSPIPPNMLGFNND 346

Query: 331 LKP-RFDLNKAKELMKEAGYEKGFNLTMIA-PNNR--YVNDEKIAQAASAMLSKIGIKVD 386
           LK   +D  KAK L+K+AG EKG ++T+ + P  R    N ++IA+   +  +K+G+K  
Sbjct: 347 LKDYSYDPEKAKALLKQAGLEKGADVTLWSMPVQRPYNPNSKRIAEMIQSDWAKVGVKAK 406

Query: 387 LKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNA 446
           + +    +Y     K   D  + GW  D  D  NF + L       TG    N   + + 
Sbjct: 407 IVSYEWGEYLSGMRKGEHDSALFGWMSDNGDPDNFADVLLGCDSIKTGS---NAARWCDK 463

Query: 447 EVDKLVNAANEETDLEKRSTMLKKVEEILYNEAAFVPLHFQDPSWAAK-NTLDIAPIING 505
             D LV  A   ++  +R+ +  + +EI Y +A ++ L      +A + N    +  + G
Sbjct: 464 GYDDLVKKAKLTSNPGERAKLYSQAQEIFYAQAPWIALANGKTFYATRSNVTGYSVSLMG 523

Query: 506 MDF 508
            DF
Sbjct: 524 SDF 526