Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  144 bits (363), Expect = 8e-39
 Identities = 128/508 (25%), Positives = 223/508 (43%), Gaps = 47/508 (9%)

Query: 12  LIAAGLSFGA----MAADITVAYDADPVSMDPHEQLSGGTLQLS-HMVFDPLIRFTQ-KM 65
           L+AA + F A    +A  +TV  ++ P   D  +  S  T   S  ++F+ L+ + + + 
Sbjct: 5   LLAAAVLFTAPALVLAKPLTVCTESSPDGFDVVQFNSLVTTNASADVIFNSLVSYDEAEK 64

Query: 66  EFEPRLAESWQ-RVDNETMRFTLRKGVKFHSGNDF------TADDVVWTFNRLKES---- 114
           +  P LA+ W    D  T  F LR  V+F + + F       ADDVV+TF+R+       
Sbjct: 65  KVVPALADKWDVSADGLTYTFHLRPNVQFQTTDYFKPTRALNADDVVFTFDRMLNDSNPW 124

Query: 115 -----------ADFKGIFEPLVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTG 163
                      A   G+ + + S++KVDD T++ +         ++ T  F   +  Y+ 
Sbjct: 125 HKVAGASGFPHAQSMGLPKLIKSISKVDDNTVKFELNAPDATFVSILTMGF---ASIYSA 181

Query: 164 TTADGKNKAEIVKHGNSF-ASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDK 222
             AD     +++K G     +    GTGPF + +  +   + +  NP YW    K  +D+
Sbjct: 182 EYAD-----QLLKAGKQVDLNSKPIGTGPFELKSYTKDAVIRYDVNPTYW--GPKPKIDR 234

Query: 223 LTLAVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNS 282
           L  A+  +   R   + +G   +     P D    K  K + +   P        +N   
Sbjct: 235 LIYAITPDATVRAQKVKAGECQIALSPKPQDLAEAKGDKSLAIVQTPAFMTAFVALNTQK 294

Query: 283 NPALKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKAK 341
            P L + +VR A+  A +    +  V    AT A    P     Y++ +K   +D  KAK
Sbjct: 295 KP-LDNQKVRAALNMAFDRTTYLKTVFDNTATPAVNPYPPNTWSYDKAVKAWPYDPAKAK 353

Query: 342 ELMKEAGYEKGFNLTM-IAPNNRYVNDEKIAQAA--SAMLSKIGIKVDLKTMPKAQYWPE 398
           +L+ +AGY  GF  T+ + PN   +N    A A    A  +KIG+K D+K +   +   +
Sbjct: 354 KLLADAGYPNGFETTIWVRPNGSVLNPNPKAGAELLQADFAKIGVKADVKVIEWGELIKQ 413

Query: 399 FDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEE 458
             +   D L +GW  D  D  N+   L+     N  K   N   + + ++DKL+      
Sbjct: 414 AKQGQHDSLFMGWAGDNGDPDNY---LSPLFSCNAVKSGINFARFCDQDLDKLIADGKAT 470

Query: 459 TDLEKRSTMLKKVEEILYNEAAFVPLHF 486
            D  KR+   ++ ++I++++A ++PL +
Sbjct: 471 PDQAKRAKAYEQAQQIIHDQALWIPLGY 498