Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., acetate kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  146 bits (369), Expect = 2e-39
 Identities = 126/481 (26%), Positives = 223/481 (46%), Gaps = 41/481 (8%)

Query: 31  DADPVSMDPHEQLSGGTLQL-SHMVFDPLIRFTQKM-EFEPRLAESWQRVDNE-TMRFTL 87
           + +P S +P    SG T+   SH ++  L+ +     +  P LA SW   D+  + RFTL
Sbjct: 38  EGNPESFNPQLVTSGTTIDATSHQIYSRLVDYDALSGQLVPALATSWAESDDGLSYRFTL 97

Query: 88  RKGVKF-HSGN-----DFTADDVVWTFNRLKESAD------------FK--GIFEPLVSL 127
           R+ VKF HS       DF ADDV+++FNR+ +               F+  G  E + S+
Sbjct: 98  RENVKFQHSSRFTPSRDFNADDVLFSFNRIIDKHHPYHGVSRTGYPFFQSIGFSEQVKSV 157

Query: 128 TKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFASENIS 187
            K++D+ +       + L    A+++  + + F    +++  ++   + H  +     I 
Sbjct: 158 EKINDHEV------IFRLARKDASFLSNLATDFAVILSSEYADQQLALGHPENLDHFAI- 210

Query: 188 GTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGVDMIA 247
           GTGPFT+    +   + ++RNP++W + +K  VD L   +  +   R+A L++G   + A
Sbjct: 211 GTGPFTLVHYAKNEYIRYRRNPDFWGEPAK--VDMLVYDITPKSTVRLAKLIAGDCSVSA 268

Query: 248 PVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPALKDVRVRQAIVYAINNEGIVDK 307
                +   IK  + +++ + PG  V  +  N    P L DVRVR+A+ YA++ + I+  
Sbjct: 269 LPKAGELPVIKQHEQLNIESQPGLNVAFWAFN-TQKPPLDDVRVRRALAYAVDKQNILRA 327

Query: 308 VMKGAATTAAQQSPVGYAGYNENLKPRFDLN--KAKELMKEAGYEKGFNLTMIAPNNRYV 365
           V +  A  A    P     Y+ N K   D N  KA++L+KEAG +         P  R  
Sbjct: 328 VYQNTAIEAIGVLPPASWAYDSN-KKLLDYNPQKARDLLKEAGIKHLSIDIWAMPVARAY 386

Query: 366 NDE--KIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFTE 423
           N    K A+   + L+ IG+KV++ +   + +     +   D ++IGW+ D  D  N   
Sbjct: 387 NPNALKTAELIQSDLANIGVKVNIISYDWSVFSQRLSRDEYDSVLIGWNADNSDPDN--- 443

Query: 424 FLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEAAFVP 483
           F T     +  +   N   + N E D +++ A E +   +R  + ++ E  L  +   + 
Sbjct: 444 FFTPLLSCSAMQSNNNRSRWCNKEFDAILDRAREVSTQAERKEIYQEAEAFLAEQVPMLS 503

Query: 484 L 484
           L
Sbjct: 504 L 504