Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., ABC transporter ATP-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  442 bits (1137), Expect = e-128
 Identities = 255/606 (42%), Positives = 370/606 (61%), Gaps = 50/606 (8%)

Query: 3   LLEVKNLRIEYPSRHGVHA--AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60
           +L V+ L I +P         AVK +  +++RGEI+G+VGESG+GKS     ++ L+  P
Sbjct: 38  ILAVRQLEIAFPDADTREKLLAVKGVDFELERGEILGIVGESGSGKSVTSLGIMGLVPKP 97

Query: 61  GTIAGG-------EVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLT 113
           G +          +   +   +  L     R+ RG KI  IFQ+PM+SLNP++T+  Q+ 
Sbjct: 98  GWVEPSSEIDFFAQAQSSPVNLVALPEGDKRQYRGGKIAMIFQEPMSSLNPVYTIGFQII 157

Query: 114 ETIHANMQVSAEEAYQRALSLMKQVGI----------------PQPENR----------- 146
           E I  +  V+ EEA  +A++L+++V +                 QP  +           
Sbjct: 158 EAIRLHQNVTQEEAQNQAIALLQEVRVLPKDEVLEEEFLAQEQAQPRGKVTQNLASYIQQ 217

Query: 147 -----LKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELCK 201
                LK+YPH+ SGG  QRV+IA+A++  P L+IADEPTTALDV++Q +IL L+R+LCK
Sbjct: 218 RKQSFLKRYPHELSGGQLQRVMIAMAISANPRLLIADEPTTALDVTVQAEILRLLRDLCK 277

Query: 202 KN-NVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISAVPRS 260
           ++  +  + ++HD+GV++ + DRVAVMYRG++VE G   ++L +P+HPYT+ L++  PR 
Sbjct: 278 QHQEMSLIFISHDLGVINEIADRVAVMYRGEIVEQGLKEQILHSPQHPYTKGLLACRPRL 337

Query: 261 DRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQD---HRKYTGPLLKVENVNLRFVTKDS 317
           + +LD  P V     A +  P   +     Q  D     +   PLL+V+N+ + +  +  
Sbjct: 338 EIQLDHLPTVGDFLNA-DGPPPSYQVITPAQESDRLAQLQAKPPLLEVQNLTVSY-GQGG 395

Query: 318 LFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDL 377
           LF  ++   +A N+VSF V+ GET GLVGESG GKST+AR +  L     GR+ F+G ++
Sbjct: 396 LF-GKKSVFKAVNDVSFQVYPGETLGLVGESGCGKSTLARALLRLTPIQTGRIIFDGQNV 454

Query: 378 TALKSEHER-RPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVND 436
            AL  + ++ R LRR+MQ++FQNPY S+NPRM I   I EP+  H+  +S  + RQ V +
Sbjct: 455 AALPEKSQQWRRLRREMQIIFQNPYNSLNPRMTIGRAIQEPLIIHEPKQSTKQQRQRVAE 514

Query: 437 LLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNL 496
           LLE VG+      +YPHE SGGQRQRI IARALA  PR +ICDE  SALDVSVQAQ+LNL
Sbjct: 515 LLERVGISPQWFNRYPHELSGGQRQRICIARALALNPRFIICDESVSALDVSVQAQVLNL 574

Query: 497 LKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLE-VAPTEQLFTDPQHEYSKKLI 555
           LK+LQ +L LT +FISHDL V+R M DR+ VM  G L E +   +++  +PQ  Y+KKLI
Sbjct: 575 LKELQRDLQLTYIFISHDLSVVRFMGDRIMVMNRGQLAEPINTAQEIIENPQSAYTKKLI 634

Query: 556 SLMPEF 561
             +P F
Sbjct: 635 QSIPRF 640



 Score =  164 bits (415), Expect = 1e-44
 Identities = 108/274 (39%), Positives = 158/274 (57%), Gaps = 20/274 (7%)

Query: 3   LLEVKNLRIEYPS-----RHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLL 57
           LLEV+NL + Y       +  V  AV  ++  +  GE +G+VGESG GKST+  A++ L 
Sbjct: 381 LLEVQNLTVSYGQGGLFGKKSVFKAVNDVSFQVYPGETLGLVGESGCGKSTLARALLRLT 440

Query: 58  SPPGTIAGGEVYLNGEKISGL--SPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
                I  G +  +G+ ++ L    Q  R +R  ++  IFQ+P  SLNP  T+   + E 
Sbjct: 441 P----IQTGRIIFDGQNVAALPEKSQQWRRLR-REMQIIFQNPYNSLNPRMTIGRAIQEP 495

Query: 116 --IHANMQVSAEEAYQRALSLMKQVGI-PQPENRLKQYPHQFSGGMRQRVVIAIALAGEP 172
             IH   Q S ++  QR   L+++VGI PQ  NR   YPH+ SGG RQR+ IA ALA  P
Sbjct: 496 LIIHEPKQ-STKQQRQRVAELLERVGISPQWFNR---YPHELSGGQRQRICIARALALNP 551

Query: 173 DLIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDL 232
             II DE  +ALDVS+Q Q+LNL++EL +   +  + ++HD+ VV  + DR+ VM RG L
Sbjct: 552 RFIICDESVSALDVSVQAQVLNLLKELQRDLQLTYIFISHDLSVVRFMGDRIMVMNRGQL 611

Query: 233 VEFGPTAK-VLGTPEHPYTRSLISAVPRSDRKLD 265
            E   TA+ ++  P+  YT+ LI ++PR    L+
Sbjct: 612 AEPINTAQEIIENPQSAYTKKLIQSIPRFPETLN 645