Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  436 bits (1122), Expect = e-127
 Identities = 248/567 (43%), Positives = 359/567 (63%), Gaps = 32/567 (5%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           LLE++ L+I +    G   A++ L L +Q GE VG+VGESG+GKS    A+  LL     
Sbjct: 5   LLEIRQLQICF----GEAIALQGLDLVVQPGESVGIVGESGSGKSVACLAIPGLLPKTAR 60

Query: 63  IAGGEVYLN-----GEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIH 117
            +G   + +        +  L  + +R++RG ++GFIFQ+P++SLNP+F+   QL E I 
Sbjct: 61  CSGQIAFRSVAGQSSRDLLTLPERELRQLRGDRLGFIFQEPLSSLNPVFSAGFQLLEAIQ 120

Query: 118 ANMQVSAEEAYQRALSLMKQVGI----PQPENRLKQYPHQFSGGMRQRVVIAIALAGEPD 173
            ++ +S  EA QR ++L+++V +     Q    L++YPHQ SGG RQR++IAIALA  PD
Sbjct: 121 QHLPLSQAEAQQRVIALLQEVQLIREPSQAAQILRRYPHQLSGGQRQRLMIAIALAANPD 180

Query: 174 LIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLV 233
           L++ADEPTTALD ++Q  +L L+R L ++  +  + V+HD+GV++ V DRV V+YRG +V
Sbjct: 181 LLLADEPTTALDATVQASVLQLLRRLQQQRQMAMIFVSHDLGVIAEVADRVVVLYRGQVV 240

Query: 234 EFGPTAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVS-YIEEAKELKPLDVKSHWLGQS 292
           E G  A VL +P+HPYT+ L++  P+ + +    P V+ ++E   E + L  +S      
Sbjct: 241 EQGRVADVLNSPQHPYTQGLVACRPQINPRSCYLPTVADFLEGQTEPRSLPPRS------ 294

Query: 293 QDHRKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGK 352
                 T PLL+VE + + +  + + F       QA  N+SF +  G T GLVGESG GK
Sbjct: 295 ----PATQPLLQVEQLGITYRGRSTAF-------QAVQNLSFTLPAGLTLGLVGESGCGK 343

Query: 353 STIARVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFD 412
           S++AR + GL   + G++  +   L  L+S  +R+ LR+ +QMVFQ+P  +++PR  +  
Sbjct: 344 SSLARCLVGLVPASEGQIWLDQQPLD-LRSSRDRQRLRQTVQMVFQDPAAALDPRWTVGS 402

Query: 413 IIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATR 472
            I EP+R  +  R  +  ++++   L+ V L    G +YPHEFSGGQRQRI IARAL  +
Sbjct: 403 AILEPLRIKQPRRDRTADQRLLKQWLQRVDLPTDIGDRYPHEFSGGQRQRICIARALIGQ 462

Query: 473 PRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGT 532
           PRLLICDE  SALDVSVQAQILNLLK LQ EL LT LFISHDL V+R M DR+ VM  G 
Sbjct: 463 PRLLICDESVSALDVSVQAQILNLLKQLQAELGLTYLFISHDLAVVRYMSDRILVMNQGQ 522

Query: 533 LLEVAPTEQLFTDPQHEYSKKLISLMP 559
           L E +PTEQLF  PQ +Y+++LI+ +P
Sbjct: 523 LEEDSPTEQLFQRPQSDYTRRLIAAIP 549



 Score =  157 bits (397), Expect = 1e-42
 Identities = 99/249 (39%), Positives = 140/249 (56%), Gaps = 18/249 (7%)

Query: 328 ASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNA---GRVTFEGI------DLT 378
           A   +   V  GE+ G+VGESGSGKS     I GL    A   G++ F  +      DL 
Sbjct: 20  ALQGLDLVVQPGESVGIVGESGSGKSVACLAIPGLLPKTARCSGQIAFRSVAGQSSRDLL 79

Query: 379 ALKSEHERRPLRR-QMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDL 437
            L  E E R LR  ++  +FQ P +S+NP       + E I+ H L  S++E +Q V  L
Sbjct: 80  TLP-ERELRQLRGDRLGFIFQEPLSSLNPVFSAGFQLLEAIQQH-LPLSQAEAQQRVIAL 137

Query: 438 LEHVGLGKMAGL------KYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQA 491
           L+ V L +          +YPH+ SGGQRQR+ IA ALA  P LL+ DEPT+ALD +VQA
Sbjct: 138 LQEVQLIREPSQAAQILRRYPHQLSGGQRQRLMIAIALAANPDLLLADEPTTALDATVQA 197

Query: 492 QILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYS 551
            +L LL+ LQ +  + M+F+SHDL VI ++ DRV V+  G ++E      +   PQH Y+
Sbjct: 198 SVLQLLRRLQQQRQMAMIFVSHDLGVIAEVADRVVVLYRGQVVEQGRVADVLNSPQHPYT 257

Query: 552 KKLISLMPE 560
           + L++  P+
Sbjct: 258 QGLVACRPQ 266