Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  451 bits (1159), Expect = e-131
 Identities = 242/566 (42%), Positives = 360/566 (63%), Gaps = 41/566 (7%)

Query: 1   MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60
           M+LL +  L + YP       A++ L+L++  GE +G+VGESG GKST+G A++ LL PP
Sbjct: 1   MTLLSIDQLSVTYPGSE--QPALQQLSLELAAGERLGLVGESGCGKSTLGRAILRLL-PP 57

Query: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120
           G+   G++ L G+ +  L  ++++  RG ++G +FQDPMT L+PL T+   L ET+  + 
Sbjct: 58  GSHQQGDIRLAGQALGQLQGRSLQRFRGGQVGLVFQDPMTRLDPLQTIGDHLLETLQVHR 117

Query: 121 -QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADE 179
             +S  +A Q+ALS +++V IP   NR  QYPHQFSGGMRQRV IA+AL  +P L++ADE
Sbjct: 118 PHLSRRQAKQQALSWLERVRIPA--NRWSQYPHQFSGGMRQRVAIALALLLQPRLVVADE 175

Query: 180 PTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTA 239
           PTT+LDV++  +IL  +  LC + N   +L++HD+ +V+   DR+AV+Y+G LVE GPT 
Sbjct: 176 PTTSLDVTVAAEILQELTRLCSEENTSLLLISHDLPMVAAYCDRIAVLYQGQLVETGPTT 235

Query: 240 KVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYT 299
            VL  P+HPYT++L+ +   +                            +  S      T
Sbjct: 236 AVLTRPQHPYTQTLLQSARAA----------------------------IASSPSTLPAT 267

Query: 300 GPLLKVENVNLRFVTKDSLFESRR---EYVQASNNVSFAVHEGETFGLVGESGSGKSTIA 356
            PLL++ENV   F    S  +  R   E V+A + +S  V  GET GL+GESG GKST+ 
Sbjct: 268 TPLLQLENVTQHFRVAQSWLQGWRGGGEIVRAVDGLSLEVWPGETLGLIGESGCGKSTLL 327

Query: 357 RVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAE 416
           R I  L +P+ G+V F+G DLT L  +   R LRR++Q++FQ+P   +NPR+ I D IA+
Sbjct: 328 RTILQLLRPSQGKVLFQGQDLTQLP-DRRLRSLRRELQLIFQDPAACLNPRLTIGDAIAD 386

Query: 417 PIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRPR 474
           P++   L R  +  +Q++  +LE VGL        +YPH+ SGGQ+QR++IARAL TRP+
Sbjct: 387 PLKIQGLARGAAAKQQVLA-ILEQVGLTPAPTWIDRYPHQLSGGQQQRVAIARALITRPK 445

Query: 475 LLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLL 534
           L++CDEP S LD +VQAQ+L L+++L+ +LNLT LF++HDL V R+ CDRV V+Q G ++
Sbjct: 446 LVLCDEPVSMLDATVQAQVLALMQELKQQLNLTYLFVTHDLRVAREFCDRVAVLQRGKIV 505

Query: 535 EVAPTEQLFTDPQHEYSKKLISLMPE 560
           E+ P  Q+ T P+H Y++ L++ +PE
Sbjct: 506 EIGPAAQVLTQPEHPYTRSLLASLPE 531