Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  394 bits (1013), Expect = e-114
 Identities = 220/561 (39%), Positives = 341/561 (60%), Gaps = 25/561 (4%)

Query: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLL-SPP 60
           S+L V++L ++   +      +  ++LD+ +GEI+G+VGESG+GKS    A++ LL S  
Sbjct: 4   SVLSVRDLTVKAHLQGETRTLLDGISLDLAKGEILGLVGESGSGKSLFCRALVRLLPSSL 63

Query: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120
             I GG V L G  ++ ++   M EVRG++IG IFQ+P + L+P+  +  Q+ E I  + 
Sbjct: 64  LKIEGGAVLLGGRDLTAVTDAEMLEVRGAEIGMIFQNPTSHLDPVMRIGDQIAEGIRYHQ 123

Query: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180
            +   +A   A+ ++ Q+G P+P  +   YPH+ SGGMRQR +I +AL+  P ++IADEP
Sbjct: 124 GLGGRDARAAAVEILGQIGFPEPVRQYDSYPHELSGGMRQRAMIGVALSCNPQILIADEP 183

Query: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240
           TTALDV+IQ QIL L+ ++  +  +  +L+THD+G+V+   DR+AVM  G L+E GP   
Sbjct: 184 TTALDVTIQAQILKLLMDIRDRRGLSIILITHDLGIVAQTCDRIAVMRGGKLLEQGPKRT 243

Query: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300
           +L  P+ PYT  LI + P            S  E       L   SH   +S        
Sbjct: 244 ILSAPQDPYTVRLIHSHP------------SMPEAVLPATSLPAPSHGATRS-------- 283

Query: 301 PLLKVENVNLRFVTKDSLFESRR-EYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVI 359
            LL+++++++RF +  SLF  +    V A + +S  +  GET G+VGESGSGKST+AR +
Sbjct: 284 -LLEIDDLHVRFPSGGSLFRGKNARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAM 342

Query: 360 AGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIR 419
            GL   +AG V+F+GIDL+  +     R LR +  MVFQ+P+ ++NPR+ I   +AE ++
Sbjct: 343 LGLTPISAGHVSFDGIDLSQQRGAGLTR-LRHESAMVFQDPFNALNPRLTIGQTLAEVLK 401

Query: 420 FHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICD 479
             K     ++    + +LL+ VGL +    + P   SGGQ QR  IARALA  PRL+I D
Sbjct: 402 VQKKI-GGADIPARIGELLDLVGLEREFAHRKPRSMSGGQCQRAGIARALAVDPRLIIAD 460

Query: 480 EPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPT 539
           E  +ALDV++QAQI++L + L  +LNLT++FI+HDL ++R +C+R  VM  G ++E   +
Sbjct: 461 ECVAALDVTIQAQIVDLFRKLARDLNLTLIFIAHDLAIVRNLCERTVVMHRGEIIEEGRS 520

Query: 540 EQLFTDPQHEYSKKLISLMPE 560
           E +F+ P+H Y+  LI+ +P+
Sbjct: 521 EDVFSRPKHPYTAALIAAIPD 541



 Score =  166 bits (421), Expect = 2e-45
 Identities = 99/268 (36%), Positives = 149/268 (55%), Gaps = 15/268 (5%)

Query: 2   SLLEVKNLRIEYPSRHGVH--------AAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAV 53
           SLLE+ +L + +PS   +         +AV  ++L I  GE VG+VGESG+GKST+  A+
Sbjct: 283 SLLEIDDLHVRFPSGGSLFRGKNARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAM 342

Query: 54  IDLLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLT 113
           + L      I+ G V  +G  +S      +  +R      +FQDP  +LNP  T+   L 
Sbjct: 343 LGLTP----ISAGHVSFDGIDLSQQRGAGLTRLRHES-AMVFQDPFNALNPRLTIGQTLA 397

Query: 114 ETIHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPD 173
           E +    ++   +   R   L+  VG+ +     K  P   SGG  QR  IA ALA +P 
Sbjct: 398 EVLKVQKKIGGADIPARIGELLDLVGLEREFAHRK--PRSMSGGQCQRAGIARALAVDPR 455

Query: 174 LIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLV 233
           LIIADE   ALDV+IQ QI++L R+L +  N+  + + HD+ +V N+ +R  VM+RG+++
Sbjct: 456 LIIADECVAALDVTIQAQIVDLFRKLARDLNLTLIFIAHDLAIVRNLCERTVVMHRGEII 515

Query: 234 EFGPTAKVLGTPEHPYTRSLISAVPRSD 261
           E G +  V   P+HPYT +LI+A+P  D
Sbjct: 516 EEGRSEDVFSRPKHPYTAALIAAIPDID 543