Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  437 bits (1123), Expect = e-127
 Identities = 236/556 (42%), Positives = 345/556 (62%), Gaps = 33/556 (5%)

Query: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLS-PP 60
           +LL V++L + +        AV  ++ DI+RGE V +VGESG+GKS   N+++ LL  P 
Sbjct: 4   TLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPA 63

Query: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120
            +   GE+  NG+ +   S   +R VRG+ +  IFQ+PMTSLNPL T+E Q+ E +  + 
Sbjct: 64  ASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQ 123

Query: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180
            +    A  R L L++QVGI + E RL  YPHQ SGG RQRV+IA+ALA  P+L+IADEP
Sbjct: 124 DLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEP 183

Query: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240
           TTALDV++Q QIL L++ L  ++ +  + +THD+G+V  + DRV VM +G +VE GPTA+
Sbjct: 184 TTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAE 243

Query: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300
           +   P+H YTR L+++ PR                  E  P D     + +++D + +  
Sbjct: 244 IFANPQHAYTRHLLASEPRG-----------------EPPPSDASRPIVIEAKDMKVW-- 284

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
                      F  K        ++V+A + +   +  G+T G+VGESGSGK+T+   + 
Sbjct: 285 -----------FPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALT 333

Query: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420
            L   + GR+ F G D+ A  S  E RPLR +MQ+VFQ+PY S++PRM I DII E ++ 
Sbjct: 334 RLIS-SKGRIAFVGEDIDAY-SFREMRPLRNRMQVVFQDPYGSLSPRMSIADIIGEGLKI 391

Query: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480
           H+   ++ E  Q V   LE VGL      +YPHEFSGGQRQRI+IARA+  +P+ ++ DE
Sbjct: 392 HEKALTDGERDQRVAAALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDE 451

Query: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540
           PTSALD+SVQAQ+++LL+DLQ + NL  LFISHDL V+R + + V VM++G ++E  P E
Sbjct: 452 PTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVEQGPAE 511

Query: 541 QLFTDPQHEYSKKLIS 556
           ++F  P  +Y+K L++
Sbjct: 512 RIFEAPTEDYTKALMA 527



 Score =  189 bits (481), Expect = 2e-52
 Identities = 111/249 (44%), Positives = 148/249 (59%), Gaps = 10/249 (4%)

Query: 319 FESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNA-----GRVTFE 373
           F    E   A + +SF +  GET  LVGESGSGKS  A  I  L    A     G + F 
Sbjct: 15  FHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFN 74

Query: 374 GIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQI 433
           G DL     +  R      + M+FQ P TS+NP   I   I E +  H+  +  +   + 
Sbjct: 75  GKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQDLKGAAARART 134

Query: 434 VNDLLEHVGLG---KMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQ 490
           + +LLE VG+    K  G  YPH+ SGGQRQR+ IA ALA RP LLI DEPT+ALDV+VQ
Sbjct: 135 L-ELLEQVGIREAEKRLGA-YPHQLSGGQRQRVMIAMALANRPELLIADEPTTALDVTVQ 192

Query: 491 AQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEY 550
           AQIL LLK L+DE  ++MLFI+HDL ++R++ DRV VM  G ++E  PT ++F +PQH Y
Sbjct: 193 AQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAEIFANPQHAY 252

Query: 551 SKKLISLMP 559
           ++ L++  P
Sbjct: 253 TRHLLASEP 261



 Score =  162 bits (411), Expect = 2e-44
 Identities = 94/262 (35%), Positives = 162/262 (61%), Gaps = 16/262 (6%)

Query: 3   LLEVKNLRIEYPSRHGV------HA-AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55
           ++E K++++ +P + G       H  AV  + L ++ G+ +GVVGESG+GK+T+G A+  
Sbjct: 275 VIEAKDMKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTR 334

Query: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
           L+S  G IA       GE I   S + MR +R +++  +FQDP  SL+P  ++   + E 
Sbjct: 335 LISSKGRIA-----FVGEDIDAYSFREMRPLR-NRMQVVFQDPYGSLSPRMSIADIIGEG 388

Query: 116 IHANMQVSAE-EAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDL 174
           +  + +   + E  QR  + +++VG+  P  R + YPH+FSGG RQR+ IA A+  +P  
Sbjct: 389 LKIHEKALTDGERDQRVAAALEEVGL-DPATRWR-YPHEFSGGQRQRIAIARAMVLKPQF 446

Query: 175 IIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVE 234
           ++ DEPT+ALD+S+Q Q+++L+R+L +K+N+  + ++HD+ VV  + + V VM  G +VE
Sbjct: 447 VMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVE 506

Query: 235 FGPTAKVLGTPEHPYTRSLISA 256
            GP  ++   P   YT++L++A
Sbjct: 507 QGPAERIFEAPTEDYTKALMAA 528