Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  431 bits (1108), Expect = e-125
 Identities = 234/564 (41%), Positives = 346/564 (61%), Gaps = 30/564 (5%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLS-PPG 61
           +L +  L +++ S      AV  ++ D+  GE + ++GESG+GKS     V+ L+  PPG
Sbjct: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67

Query: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121
            I  G +  +G  +S L  +  RE+ G +I  IFQDP+  LNP++TV  Q+ E   ++ +
Sbjct: 68  DIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGE 127

Query: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181
                   + + L+++VGIP+ + R+  YPHQFSGG RQRV+IA+A+A +PD++IADEPT
Sbjct: 128 GEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPT 187

Query: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241
           TALDVS+Q QIL L+R+L ++  +  +++THD+ V + + DR+ VM  G +VE G    V
Sbjct: 188 TALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDV 247

Query: 242 LGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTGP 301
              P H YTR L+SAVP +D                   P   ++   G+          
Sbjct: 248 FTNPSHAYTRRLMSAVPHADA------------------PKAPRNAAQGEV--------- 280

Query: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361
           LL+V +++  +      F  +RE+ +A ++VSF +  GET G+VGESGSGKS+IAR++  
Sbjct: 281 LLQVAHLSKHYKLGSGPFSPKREF-RAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLR 339

Query: 362 LYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFH 421
           L +P +G   F G D+  LK +      RR++QMVFQ+P+ SMNPRM +  II+EP   H
Sbjct: 340 LNEPTSGAALFAGEDIFELKGK-ALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIH 398

Query: 422 KLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEP 481
           +         + V +LLE VGL      ++PH+FSGGQRQRI+IARALA+ P L++CDE 
Sbjct: 399 RDILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASEPELIVCDEA 458

Query: 482 TSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQ 541
            SALDVS+Q Q++ LL DL+  L L+ +FI+HDLP++RQ  DR+ VMQ G ++E   TE 
Sbjct: 459 VSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEA 518

Query: 542 LFTDPQHEYSKKLISLMPEFTGLR 565
           LF  PQHEY++ L+  +P+   LR
Sbjct: 519 LFVSPQHEYTQALLRAVPQPKWLR 542



 Score =  183 bits (464), Expect = 2e-50
 Identities = 111/278 (39%), Positives = 162/278 (58%), Gaps = 15/278 (5%)

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
           P+L+++ + + F+       S  + V+A ++VSF V  GET  ++GESGSGKS     + 
Sbjct: 7   PILRIDKLTVDFL-------SEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVM 59

Query: 361 GLYQ--PN---AGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIA 415
           GL    P    +G + F+G DL+ L  E  R    R++ M+FQ+P   +NP   +   IA
Sbjct: 60  GLIDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIA 119

Query: 416 EPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRP 473
           E    H      +   ++V  LLE VG+ +       YPH+FSGGQRQR+ IA A+A +P
Sbjct: 120 EVFESHGEGEGGAVRDKVVR-LLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKP 178

Query: 474 RLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTL 533
            +LI DEPT+ALDVSVQAQIL LL+DLQ E  + ++ I+HDL V   M DR+ VM  G +
Sbjct: 179 DILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKV 238

Query: 534 LEVAPTEQLFTDPQHEYSKKLISLMPEFTGLRESTTAA 571
           +E    E +FT+P H Y+++L+S +P     +    AA
Sbjct: 239 VESGKAEDVFTNPSHAYTRRLMSAVPHADAPKAPRNAA 276