Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., mureinpeptideoligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  430 bits (1106), Expect = e-125
 Identities = 249/573 (43%), Positives = 352/573 (61%), Gaps = 26/573 (4%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           LL V+ LRI +    G   AV+     I  G +  +VGESG+GKS +  A++ +L P   
Sbjct: 7   LLRVEGLRITFSVLGGEVEAVRGANFRILPGRVTALVGESGSGKSAISQAIMGIL-PSVA 65

Query: 63  IAGGEVYLNGEKISG---------LSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLT 113
             GG V  N  +               + ++E+RG++I  IFQ+PMTSL+PL T+ +Q++
Sbjct: 66  SVGGRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHTIGNQIS 125

Query: 114 ETIHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPD 173
           E +  +         +R   L+  VG   P+     YP + SGGMRQR +IA+AL   P 
Sbjct: 126 EVLKIHTDADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMALICRPA 185

Query: 174 LIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLV 233
           L+IADEPTTALDV++Q QIL L+REL  K N+  +L+THD+GVV+N+ D V V+Y G++V
Sbjct: 186 LLIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVVIYHGEIV 245

Query: 234 EFGPTAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQ 293
           E GP   +   P HPY + L++AVP  D K          E  K L+ + VK+  +   +
Sbjct: 246 EAGPVDAIFRNPRHPYLKGLMAAVPHFDMKPG--------ERLKALREVPVKAGAIVGDR 297

Query: 294 DHRKYTGP--LLKVENVNLRFVTKDS-LFESRREY-VQASNNVSFAVHEGETFGLVGESG 349
           + +K  GP  L+ V N++  F T+ S  F S   Y  +A +NVSF +  GE  GLVGESG
Sbjct: 298 EVKKAAGPNVLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESG 357

Query: 350 SGKSTIARVIAGLYQPNAGRVTFEGID--LTALKSE-HERRPLRRQMQMVFQNPYTSMNP 406
            GK+T+++++     P+ G +TF+  +  L  LK +  E + LR ++QMVFQ+P +S++P
Sbjct: 358 CGKTTVSKILMRAVTPDKGTITFDDGEGALDVLKLDGGELKALRAKIQMVFQDPVSSLSP 417

Query: 407 RMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIA 466
           RM + +I++EP+  H     +S   + V  LL+ VGL +    +YPH FSGGQRQRI IA
Sbjct: 418 RMTVKNILSEPLEIHGRGTPKSR-EEHVRSLLQAVGLDQRFINRYPHSFSGGQRQRIGIA 476

Query: 467 RALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVG 526
           RALA  P+LLICDEP SALDVSVQAQILNLLKDLQ EL LTMLFISH+L V+  M DR+ 
Sbjct: 477 RALALVPQLLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIA 536

Query: 527 VMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559
           VM  G ++E+AP E L  +P H Y++ L++ +P
Sbjct: 537 VMCAGRIVELAPREVLMRNPVHPYTRSLLAAVP 569



 Score =  189 bits (481), Expect = 2e-52
 Identities = 109/251 (43%), Positives = 164/251 (65%), Gaps = 11/251 (4%)

Query: 20  HAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP-GTIA--GGEVYLNGEKIS 76
           H AV +++ DI+RGE +G+VGESG GK+TV   ++  ++P  GTI    GE  L+  K+ 
Sbjct: 334 HRAVDNVSFDIRRGECLGLVGESGCGKTTVSKILMRAVTPDKGTITFDDGEGALDVLKLD 393

Query: 77  GLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQVSAEEAYQRALSLMK 136
           G   +A+R    +KI  +FQDP++SL+P  TV++ L+E +  + + + +   +   SL++
Sbjct: 394 GGELKALR----AKIQMVFQDPVSSLSPRMTVKNILSEPLEIHGRGTPKSREEHVRSLLQ 449

Query: 137 QVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLI 196
            VG+ Q    + +YPH FSGG RQR+ IA ALA  P L+I DEP +ALDVS+Q QILNL+
Sbjct: 450 AVGLDQ--RFINRYPHSFSGGQRQRIGIARALALVPQLLICDEPVSALDVSVQAQILNLL 507

Query: 197 RELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISA 256
           ++L K+  +  + ++H++ VV  + DR+AVM  G +VE  P   ++  P HPYTRSL++A
Sbjct: 508 KDLQKELGLTMLFISHNLAVVDYMADRIAVMCAGRIVELAPREVLMRNPVHPYTRSLLAA 567

Query: 257 VPRS--DRKLD 265
           VP    DRKLD
Sbjct: 568 VPYPDLDRKLD 578



 Score =  168 bits (426), Expect = 5e-46
 Identities = 109/274 (39%), Positives = 156/274 (56%), Gaps = 22/274 (8%)

Query: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361
           LL+VE + + F    S+     E V+ +N   F +  G    LVGESGSGKS I++ I G
Sbjct: 7   LLRVEGLRITF----SVLGGEVEAVRGAN---FRILPGRVTALVGESGSGKSAISQAIMG 59

Query: 362 LYQPNA---GRVTFEGIDLTA-----LKSEHERRPLRR----QMQMVFQNPYTSMNPRMK 409
           +    A   GRV F   +  A     L  + + R ++     ++  +FQ P TS++P   
Sbjct: 60  ILPSVASVGGRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHT 119

Query: 410 IFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLG--KMAGLKYPHEFSGGQRQRISIAR 467
           I + I+E ++ H     ++  R+   +LL +VG    K A   YP E SGG RQR  IA 
Sbjct: 120 IGNQISEVLKIHT-DADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAM 178

Query: 468 ALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGV 527
           AL  RP LLI DEPT+ALDV+VQAQIL LL++LQ +LN+ ML I+HDL V+  M D V V
Sbjct: 179 ALICRPALLIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVV 238

Query: 528 MQMGTLLEVAPTEQLFTDPQHEYSKKLISLMPEF 561
           +  G ++E  P + +F +P+H Y K L++ +P F
Sbjct: 239 IYHGEIVEAGPVDAIFRNPRHPYLKGLMAAVPHF 272