Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  471 bits (1213), Expect = e-137
 Identities = 249/559 (44%), Positives = 361/559 (64%), Gaps = 29/559 (5%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLL-SPPG 61
           LLEVK+L +++ S  G   A   ++  +  GE + ++GESG+GKS   +A++ L+ +PPG
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121
            I  G V   G  +S LS    R++ G +I  IFQDP++ LNP++T+  QL E    +  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181
            S  EA QRA+ ++ +VGIP+PE R+ QYPHQFSGG RQR++I +A+A  P+++IADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241
           TALDVS+Q QIL L+++L  ++ +  +++THD+ V +N+ DRV VM  G +VE G    V
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 242 LGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTGP 301
              P H YTR+LI+A+P +D   DR P                        +  R    P
Sbjct: 246 FENPAHSYTRTLINALPHAD---DRAP-----------------------PRPARPAGKP 279

Query: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361
           +L+V+N++ +F T  S F ++   + A  N+SF V  GET G+VGESGSGKST+ARV+ G
Sbjct: 280 ILEVKNID-KFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLG 338

Query: 362 LYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFH 421
           L + + G   F G D+  +    +    RR++QMVFQ+PY+SMNPRM +FDI++EP R H
Sbjct: 339 LNEASGGEALFHGRDVLKM-DRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIH 397

Query: 422 KLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEP 481
           K    ++  R  V +LL  VGL      +YPH+FSGGQRQRI+IARALA  P L++CDE 
Sbjct: 398 KDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEA 457

Query: 482 TSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQ 541
            SALDVSVQ Q+++LL +L+D L L  +FI+HDLP++R   DR+ VM+ G ++E A TE+
Sbjct: 458 VSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEE 517

Query: 542 LFTDPQHEYSKKLISLMPE 560
           +F +PQH Y+++LI+  P+
Sbjct: 518 IFRNPQHAYTRQLINATPK 536