Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  396 bits (1017), Expect = e-114
 Identities = 227/595 (38%), Positives = 345/595 (57%), Gaps = 38/595 (6%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           LL+V++L +E+ +R G+  AV+ + + + +GE + +VGESG+GKS    AV+ +L   G 
Sbjct: 6   LLDVRDLTVEFVTRRGIVKAVQHVDISVGKGETLAIVGESGSGKSVTSYAVMRILDRAGR 65

Query: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122
           IA G V   G  +   S   MR++RG +I  IFQ+P  +LNP+  V  Q+ + +  ++Q 
Sbjct: 66  IAEGSVMFGGMDLKAASEHEMRDLRGREISMIFQNPRAALNPIRKVGDQIEDVLRQHVQS 125

Query: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182
           ++ +  ++A++ ++ V I +P  R   YP Q SGGM QRVVIA+ALA  P L+IADEPTT
Sbjct: 126 TSADRGEKAIAALEAVKIARPRERYHAYPFQLSGGMCQRVVIALALACNPQLLIADEPTT 185

Query: 183 ALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVL 242
            LDV+ Q  +++LI EL K   +  +L+THD+G+ +   DRV VM +G +VE    A + 
Sbjct: 186 GLDVTTQKAVMDLIVELTKSRGLSTILITHDLGLAAAYCDRVVVMEKGRVVETASAADIF 245

Query: 243 GTPEHPYTRSLISAVPRSDRKL------------DRFPLVSYIEEA----------KELK 280
             P+HPYT+ L+ A PR    L             R  +++ ++ A          K + 
Sbjct: 246 ANPQHPYTKKLMRATPRLGVGLRELLPEGDGGAAQRESVIAGLDPAIHPTSGEASSKTMD 305

Query: 281 PL-----DVKSHWLGQSQDHRKYTGPLLKVENVNLRF------VTKDSLFE----SRREY 325
           P      D  +    +  +  K   PLL VE +   +       T   LF        E 
Sbjct: 306 PRVKPGGDDGASGSREDANASKTAAPLLLVEKLVKEYPRQGATATLSRLFSRGPAPEPEV 365

Query: 326 VQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDL-TALKSEH 384
            +A + +SF +  GE+ GLVGESG GKST + ++  L    +GR+ F+G ++ T L    
Sbjct: 366 FRAVDGISFQIGHGESVGLVGESGCGKSTTSMMLMRLLDQTSGRIVFDGEEIGTILPQRF 425

Query: 385 ERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLG 444
            R PLR+ +QMVFQ+P  S+NPR      IA+PI      +     R    +L E VGL 
Sbjct: 426 ARLPLRKSIQMVFQDPTDSLNPRFTAARAIADPILQLGEIKGRDAVRARCEELAEQVGLP 485

Query: 445 KMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDEL 504
                ++PH+ SGGQ+ R+ IARA+A RP+L+I DEPT+ALDVSVQA +LNLL+DL+  L
Sbjct: 486 LDLLDRFPHQLSGGQKARVGIARAIALRPKLVILDEPTAALDVSVQAVVLNLLQDLKQTL 545

Query: 505 NLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559
            ++ LF+SHDL V+R +CDRV VM+ G ++E   +EQ+   P+H+Y+++L++ +P
Sbjct: 546 GMSYLFVSHDLNVVRLLCDRVIVMRSGRIVEQGSSEQVLGSPKHDYTRELLTAIP 600



 Score =  175 bits (443), Expect = 5e-48
 Identities = 111/276 (40%), Positives = 158/276 (57%), Gaps = 17/276 (6%)

Query: 299 TGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKST---- 354
           T PLL V ++ + FVT       RR  V+A  +V  +V +GET  +VGESGSGKS     
Sbjct: 3   TQPLLDVRDLTVEFVT-------RRGIVKAVQHVDISVGKGETLAIVGESGSGKSVTSYA 55

Query: 355 IARVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLR-RQMQMVFQNPYTSMNPRMKIFDI 413
           + R++    +   G V F G+DL A  SEHE R LR R++ M+FQNP  ++NP  K+ D 
Sbjct: 56  VMRILDRAGRIAEGSVMFGGMDLKAA-SEHEMRDLRGREISMIFQNPRAALNPIRKVGDQ 114

Query: 414 IAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALAT 471
           I + +R H  + S     + +   LE V + +       YP + SGG  QR+ IA ALA 
Sbjct: 115 IEDVLRQHVQSTSADRGEKAIA-ALEAVKIARPRERYHAYPFQLSGGMCQRVVIALALAC 173

Query: 472 RPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMG 531
            P+LLI DEPT+ LDV+ Q  +++L+ +L     L+ + I+HDL +    CDRV VM+ G
Sbjct: 174 NPQLLIADEPTTGLDVTTQKAVMDLIVELTKSRGLSTILITHDLGLAAAYCDRVVVMEKG 233

Query: 532 TLLEVAPTEQLFTDPQHEYSKKLISLMPEF-TGLRE 566
            ++E A    +F +PQH Y+KKL+   P    GLRE
Sbjct: 234 RVVETASAADIFANPQHPYTKKLMRATPRLGVGLRE 269