Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., microcin C transport system ATP-binding protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  391 bits (1005), Expect = e-113
 Identities = 226/560 (40%), Positives = 330/560 (58%), Gaps = 42/560 (7%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           LLE++     + +R G   AV+ L L I  GE V +VGESG+GKS    +++ L+     
Sbjct: 10  LLEIER----FSARFGDKLAVRDLNLSIACGERVALVGESGSGKSVTALSILRLVDHAHL 65

Query: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122
              G + L+GE +   + Q MR +RG+ +  +FQ+PMT+LNPLFT+  Q+ E++  +  +
Sbjct: 66  --SGRILLDGEDLLRKTEQQMRGLRGADVAMVFQEPMTALNPLFTIGKQIAESVRLHEGL 123

Query: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182
               A  R + L+++ GIP+PE R+  +PHQ SGG RQR +IA+ALA  P L++ADEPTT
Sbjct: 124 RPNAARSRGIELLRRTGIPEPERRIDSFPHQLSGGQRQRAMIAMALACRPRLLLADEPTT 183

Query: 183 ALDVSIQDQILNLIREL----CKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPT 238
           ALDV+++ QI++L+ EL      +  +  +L+THD+ +V     RVAVM +G LVE   T
Sbjct: 184 ALDVTVRQQIVDLLIELQEQEAAERGMAVLLITHDLNLVRRFAQRVAVMEKGVLVETNTT 243

Query: 239 AKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKY 298
             +   P HPYT+ L+ + PR                 + + PL+             K 
Sbjct: 244 QALFEDPRHPYTQRLLDSEPR-----------------RSVAPLE-------------KG 273

Query: 299 TGPLLKVENVNLRFVTKDSLFESR--REYVQASNNVSFAVHEGETFGLVGESGSGKSTIA 356
              LL+V+ +++ + T    + S   R   +A ++V  +V  GET G+ GESGSGKST+A
Sbjct: 274 ARRLLEVQGLSVDYSTPAKGWRSLFGRSTFRAVHDVDLSVRRGETLGIAGESGSGKSTLA 333

Query: 357 RVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAE 416
             + GL +  AG V  +G+ L+ LK+   RR L  +MQ+VFQ+P+ S++PRM +  I+ E
Sbjct: 334 ATVLGLNRAAAGHVHIDGMPLSVLKTAASRRALYSRMQVVFQDPFGSLSPRMTVEQIVGE 393

Query: 417 PIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLL 476
            +  H+        R  V  LLE VGL   A  +YPHEFSGGQRQRI+IARALA  P LL
Sbjct: 394 GLAVHRPEIDAKARRVRVASLLEEVGLPADAMPRYPHEFSGGQRQRIAIARALAVEPELL 453

Query: 477 ICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEV 536
           + DEPTSALDVS+Q Q+L LL  LQ    L+ L I+HDL V+R M  RV VM+ G ++E 
Sbjct: 454 VLDEPTSALDVSIQQQVLALLVHLQKTRKLSYLLITHDLAVMRAMAHRVIVMKSGRVVEA 513

Query: 537 APTEQLFTDPQHEYSKKLIS 556
             T ++   P H Y++ L++
Sbjct: 514 GDTLEVLHAPSHPYTRSLLA 533



 Score =  190 bits (482), Expect = 1e-52
 Identities = 109/264 (41%), Positives = 162/264 (61%), Gaps = 16/264 (6%)

Query: 3   LLEVKNLRIEY--PSR-------HGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAV 53
           LLEV+ L ++Y  P++            AV  + L ++RGE +G+ GESG+GKST+   V
Sbjct: 277 LLEVQGLSVDYSTPAKGWRSLFGRSTFRAVHDVDLSVRRGETLGIAGESGSGKSTLAATV 336

Query: 54  IDLLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLT 113
           + L       A G V+++G  +S L   A R    S++  +FQDP  SL+P  TVE  + 
Sbjct: 337 LGL----NRAAAGHVHIDGMPLSVLKTAASRRALYSRMQVVFQDPFGSLSPRMTVEQIVG 392

Query: 114 ETIHANM-QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEP 172
           E +  +  ++ A+    R  SL+++VG+P   + + +YPH+FSGG RQR+ IA ALA EP
Sbjct: 393 EGLAVHRPEIDAKARRVRVASLLEEVGLPA--DAMPRYPHEFSGGQRQRIAIARALAVEP 450

Query: 173 DLIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDL 232
           +L++ DEPT+ALDVSIQ Q+L L+  L K   +  +L+THD+ V+  +  RV VM  G +
Sbjct: 451 ELLVLDEPTSALDVSIQQQVLALLVHLQKTRKLSYLLITHDLAVMRAMAHRVIVMKSGRV 510

Query: 233 VEFGPTAKVLGTPEHPYTRSLISA 256
           VE G T +VL  P HPYTRSL+++
Sbjct: 511 VEAGDTLEVLHAPSHPYTRSLLAS 534



 Score =  168 bits (425), Expect = 6e-46
 Identities = 108/268 (40%), Positives = 157/268 (58%), Gaps = 22/268 (8%)

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
           PLL++E  + RF  K            A  +++ ++  GE   LVGESGSGKS  A  I 
Sbjct: 9   PLLEIERFSARFGDK-----------LAVRDLNLSIACGERVALVGESGSGKSVTALSIL 57

Query: 361 GL--YQPNAGRVTFEGIDLTALKSEHERRPLR-RQMQMVFQNPYTSMNPRMKIFDIIAEP 417
            L  +   +GR+  +G DL   K+E + R LR   + MVFQ P T++NP   I   IAE 
Sbjct: 58  RLVDHAHLSGRILLDGEDLLR-KTEQQMRGLRGADVAMVFQEPMTALNPLFTIGKQIAES 116

Query: 418 IRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRPRL 475
           +R H+  R  +   + + +LL   G+ +       +PH+ SGGQRQR  IA ALA RPRL
Sbjct: 117 VRLHEGLRPNAARSRGI-ELLRRTGIPEPERRIDSFPHQLSGGQRQRAMIAMALACRPRL 175

Query: 476 LICDEPTSALDVSVQAQILNLLKDLQD----ELNLTMLFISHDLPVIRQMCDRVGVMQMG 531
           L+ DEPT+ALDV+V+ QI++LL +LQ+    E  + +L I+HDL ++R+   RV VM+ G
Sbjct: 176 LLADEPTTALDVTVRQQIVDLLIELQEQEAAERGMAVLLITHDLNLVRRFAQRVAVMEKG 235

Query: 532 TLLEVAPTEQLFTDPQHEYSKKLISLMP 559
            L+E   T+ LF DP+H Y+++L+   P
Sbjct: 236 VLVETNTTQALFEDPRHPYTQRLLDSEP 263