Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., microcin C transport system ATP-binding protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  416 bits (1070), Expect = e-120
 Identities = 240/559 (42%), Positives = 341/559 (61%), Gaps = 43/559 (7%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           LLE+ +L + +    G   AV  +TL IQRGE V +VGESG+GKS    +++ LLS    
Sbjct: 27  LLELDHLHVSF----GDTVAVNDVTLAIQRGERVALVGESGSGKSVTALSILRLLSDAQV 82

Query: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122
              G +  +GE +   S + MR +RGS I  IFQ+PMT+LNPL+TV  Q+ ETI  +  V
Sbjct: 83  --SGSIRFDGEDLLAKSEREMRGMRGSDIAMIFQEPMTALNPLYTVGAQIAETIVVHDGV 140

Query: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182
           S  EA +RA++L+ + GIP+P  R+  YPHQ SGG RQR +IA+ALA  P L++ADEPTT
Sbjct: 141 SPAEARKRAVALLGRTGIPEPGKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTT 200

Query: 183 ALDVSIQDQILNLIREL----CKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPT 238
           ALDV+I+ QI+ L+ EL     +K  +  +L+THD+ +V +   R+AVM +G LVE GP 
Sbjct: 201 ALDVTIRAQIVELLLELQRDEAQKRGMAVLLITHDLNLVRHFAQRIAVMEKGVLVESGPV 260

Query: 239 AKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKY 298
            +V  +P+HPYT+ L+ + P+             +     + P+                
Sbjct: 261 EQVFESPQHPYTQRLLESRPQRS-----------VVPVLPISPV---------------- 293

Query: 299 TGPLLKVENVNLRFVTKDSLFES--RREYVQASNNVSFAVHEGETFGLVGESGSGKSTIA 356
              LL+  +V++ F TK   F    R    +A  N S +V +GET G+VGESGSGKST+A
Sbjct: 294 ---LLQARDVSVDFKTKVPGFAGWFRAGRFRAVANASVSVRQGETLGIVGESGSGKSTLA 350

Query: 357 RVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAE 416
             + GL +   G + F+G  L+  +   ++  LR  MQ+VFQ+P++S++PR  I  I+ E
Sbjct: 351 MALLGLQRTAHGEIEFQGRALSTYRGA-QQTALRSNMQVVFQDPFSSLSPRQTIERIVGE 409

Query: 417 PIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLL 476
            +  H+   +    R  V  +L  VG+ + A L+YPHEFSGGQRQRI+IARAL   P++L
Sbjct: 410 GLALHRPQMTPQARRDRVVAVLREVGIDRTALLRYPHEFSGGQRQRIAIARALVVEPQIL 469

Query: 477 ICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEV 536
           I DEPTSALDVS+Q Q+L LL  LQ + NL  +FISHDL VI  M  RV VMQ G+++E 
Sbjct: 470 ILDEPTSALDVSIQQQVLKLLAGLQQKYNLGFVFISHDLAVIGAMAHRVAVMQNGSIVES 529

Query: 537 APTEQLFTDPQHEYSKKLI 555
              E++F  P+H Y++KL+
Sbjct: 530 GEVERIFATPEHPYTRKLL 548



 Score =  179 bits (455), Expect = 2e-49
 Identities = 102/267 (38%), Positives = 163/267 (61%), Gaps = 23/267 (8%)

Query: 3   LLEVKNLRIEYPS---------RHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAV 53
           LL+ +++ +++ +         R G   AV + ++ +++GE +G+VGESG+GKST+  A+
Sbjct: 294 LLQARDVSVDFKTKVPGFAGWFRAGRFRAVANASVSVRQGETLGIVGESGSGKSTLAMAL 353

Query: 54  IDLLSPPGTIAGGEVYLNGEKIS---GLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEH 110
           + L       A GE+   G  +S   G    A+R    S +  +FQDP +SL+P  T+E 
Sbjct: 354 LGLQRT----AHGEIEFQGRALSTYRGAQQTALR----SNMQVVFQDPFSSLSPRQTIER 405

Query: 111 QLTETIHANM-QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALA 169
            + E +  +  Q++ +    R ++++++VGI +    L +YPH+FSGG RQR+ IA AL 
Sbjct: 406 IVGEGLALHRPQMTPQARRDRVVAVLREVGIDR--TALLRYPHEFSGGQRQRIAIARALV 463

Query: 170 GEPDLIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYR 229
            EP ++I DEPT+ALDVSIQ Q+L L+  L +K N+G + ++HD+ V+  +  RVAVM  
Sbjct: 464 VEPQILILDEPTSALDVSIQQQVLKLLAGLQQKYNLGFVFISHDLAVIGAMAHRVAVMQN 523

Query: 230 GDLVEFGPTAKVLGTPEHPYTRSLISA 256
           G +VE G   ++  TPEHPYTR L+ A
Sbjct: 524 GSIVESGEVERIFATPEHPYTRKLLKA 550



 Score =  176 bits (445), Expect = 3e-48
 Identities = 113/270 (41%), Positives = 160/270 (59%), Gaps = 24/270 (8%)

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
           PLL+++++++ F   D++         A N+V+ A+  GE   LVGESGSGKS  A  I 
Sbjct: 26  PLLELDHLHVSF--GDTV---------AVNDVTLAIQRGERVALVGESGSGKSVTALSIL 74

Query: 361 GLYQPN--AGRVTFEGIDLTALKSEHERRPLR-RQMQMVFQNPYTSMNPRMKIFDIIAEP 417
            L      +G + F+G DL A KSE E R +R   + M+FQ P T++NP   +   IAE 
Sbjct: 75  RLLSDAQVSGSIRFDGEDLLA-KSEREMRGMRGSDIAMIFQEPMTALNPLYTVGAQIAET 133

Query: 418 IRFHKLTRSESETRQIVNDLLEHVGL---GKMAGLKYPHEFSGGQRQRISIARALATRPR 474
           I  H    S +E R+    LL   G+   GK     YPH+ SGGQRQR  IA ALA RPR
Sbjct: 134 IVVHDGV-SPAEARKRAVALLGRTGIPEPGKRVN-SYPHQLSGGQRQRAMIAMALACRPR 191

Query: 475 LLICDEPTSALDVSVQAQILNLLKDLQ----DELNLTMLFISHDLPVIRQMCDRVGVMQM 530
           LL+ DEPT+ALDV+++AQI+ LL +LQ     +  + +L I+HDL ++R    R+ VM+ 
Sbjct: 192 LLLADEPTTALDVTIRAQIVELLLELQRDEAQKRGMAVLLITHDLNLVRHFAQRIAVMEK 251

Query: 531 GTLLEVAPTEQLFTDPQHEYSKKLISLMPE 560
           G L+E  P EQ+F  PQH Y+++L+   P+
Sbjct: 252 GVLVESGPVEQVFESPQHPYTQRLLESRPQ 281