Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., ATP-dependent DNA helicase Rep (RefSeq) from Shewanella amazonensis SB2B

 Score =  965 bits (2494), Expect = 0.0
 Identities = 485/671 (72%), Positives = 568/671 (84%), Gaps = 1/671 (0%)

Query: 1   MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA 60
           MKLNP Q++AV YVSGPCLVLAGAGSGKTRVI NKIAYLVQ+CGY+ARNIAAVTFTNKAA
Sbjct: 1   MKLNPAQNDAVHYVSGPCLVLAGAGSGKTRVIINKIAYLVQKCGYQARNIAAVTFTNKAA 60

Query: 61  REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL 120
           REMKERVAQ++G+ E+RGL +STFHTLGL I++RE KA+GLKAGFSLFDDQD LALLKEL
Sbjct: 61  REMKERVAQSMGRKEARGLWISTFHTLGLEILKREHKAVGLKAGFSLFDDQDTLALLKEL 120

Query: 121 TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
           TEK+L  DKDLL+LL ++ISNWK  ++ P  A+ +AK E++ LFA  ++ Y + M++YNA
Sbjct: 121 TEKELQEDKDLLKLLATSISNWKGALVIPDHARKIAKDEREQLFALLYQRYAQHMKAYNA 180

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           LDFDDLILLP LLLR NEEVR+RWQ RI+YLLVDEYQDTN SQYELVKLLVGER R TVV
Sbjct: 181 LDFDDLILLPTLLLRHNEEVRRRWQTRIQYLLVDEYQDTNGSQYELVKLLVGERARFTVV 240

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIYSWRGAKPQNLVLLG+DFPSLKLIKLEQNYRS+ RILRAANILIANNPHVY K
Sbjct: 241 GDDDQSIYSWRGAKPQNLVLLGKDFPSLKLIKLEQNYRSSQRILRAANILIANNPHVYDK 300

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
           +LFSELA GE ++VI A NE+ EAERV+AEII H+F+ +T Y DYAILYRGNHQSRLIE+
Sbjct: 301 SLFSELAYGEPMRVITALNEEQEAERVVAEIIRHRFVGKTSYGDYAILYRGNHQSRLIER 360

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
           +L  NR+PYKLSGGTSFFAR+EIKDIMAYLR++VNPDDDNAFLRIVN PKR IGPATLE+
Sbjct: 361 ALMTNRIPYKLSGGTSFFARSEIKDIMAYLRLVVNPDDDNAFLRIVNLPKRGIGPATLER 420

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG++AN +  S+F A FE  LE HL    L  L +F  ++V   D AERG  V+A++ L+
Sbjct: 421 LGNFANSKHISMFAAIFEPELELHLGNSALSALEQFGRFIVETGDIAERGEGVDAIKQLI 480

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
           R+I YED+LYETS S KAAEMRMKN+S+LY W+   L GD+ D +  TL EVV RLTLRD
Sbjct: 481 RNINYEDFLYETSPSAKAAEMRMKNISELYRWVTEMLNGDDLD-EPMTLPEVVGRLTLRD 539

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MMER  E++  D VQLMTLHASKGLEFPYV++IG EE ILPHQTSIDE+NVEEERRL YV
Sbjct: 540 MMERNSEDEAGDQVQLMTLHASKGLEFPYVFMIGMEERILPHQTSIDEDNVEEERRLAYV 599

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           G+TRAQREL F +C+ERRQFGE ++   SRFLDELPQDD+ WE +K+P T+++R   G+A
Sbjct: 600 GVTRAQRELWFTLCRERRQFGETMRCEPSRFLDELPQDDLIWESRKQPQTEQQRQETGKA 659

Query: 661 HIANLRAMFKK 671
           +IAN+RAMFKK
Sbjct: 660 NIANIRAMFKK 670