Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., ATP-dependent DNA helicase Rep (RefSeq) from Shewanella loihica PV-4

 Score =  956 bits (2470), Expect = 0.0
 Identities = 477/671 (71%), Positives = 564/671 (84%), Gaps = 1/671 (0%)

Query: 1   MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA 60
           MKLNP Q++AV YVSGPCLVLAGAGSGKTRVI NKIAYLVQ+CGY+ARNIAAVTFTNKAA
Sbjct: 1   MKLNPGQNDAVHYVSGPCLVLAGAGSGKTRVIINKIAYLVQKCGYQARNIAAVTFTNKAA 60

Query: 61  REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL 120
           REMKERVAQ++G+ E+RGL +STFHTLGL II+RE+K +GLK GFSLFDDQD LALLKEL
Sbjct: 61  REMKERVAQSMGRKEARGLWISTFHTLGLEIIKREYKVVGLKPGFSLFDDQDTLALLKEL 120

Query: 121 TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
           TEK+ DGDKDLLR+L++ ISNWK D++TP  A   A+ EQ  LFA  ++ Y + M++YNA
Sbjct: 121 TEKEFDGDKDLLRMLMTAISNWKGDLMTPDGAIKTARDEQSQLFALLYQRYAQHMKAYNA 180

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           LDFDDLILLP LLLR  +EVR+RWQ RI+YLLVDEYQDTNTSQYELVKLLVGER R TVV
Sbjct: 181 LDFDDLILLPTLLLRHKQEVRERWQKRIQYLLVDEYQDTNTSQYELVKLLVGERARFTVV 240

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIYSWRGAKPQNLVLLG+DFP+LKLIKLEQNYRS+ RILRAANILIANNPHVY K
Sbjct: 241 GDDDQSIYSWRGAKPQNLVLLGKDFPNLKLIKLEQNYRSSQRILRAANILIANNPHVYDK 300

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
           +LFSELA GE L+V++A NE+ EAERV+AE+I HKF+ +T++ DYAILYRGNHQSRL+E+
Sbjct: 301 SLFSELAYGEPLRVLIAANEEQEAERVVAEMIRHKFVGKTQFGDYAILYRGNHQSRLLER 360

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
           +L  NR+PYKLSGGTSFF RAEIKDIMAYLR++VNPDDDNAFLR+VN PKR IGPATLE+
Sbjct: 361 ALMTNRIPYKLSGGTSFFGRAEIKDIMAYLRLVVNPDDDNAFLRVVNLPKRGIGPATLER 420

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG+YAN +  S+F A F   L  HL    +  L +F +++V   + A RG  VEAV+ L+
Sbjct: 421 LGNYANEQHISMFEAIFHSELNHHLPPAAMSALYQFGKFIVDTGEAATRGEPVEAVKQLI 480

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
           R I YED+LYETS S KAAEMRMKN+S+LY W+   LEGD  D +  TL EVV RLTLRD
Sbjct: 481 RHINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLEGDELD-EGMTLPEVVTRLTLRD 539

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MMER  E++  D VQLMTLHASKGLEFPYV+++G EE ILPHQTSIDE+NVEEERRL YV
Sbjct: 540 MMERNSEDEAGDQVQLMTLHASKGLEFPYVFMVGVEERILPHQTSIDEDNVEEERRLAYV 599

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRAQREL F++C+ERRQFGE+++   SRFL ELPQDD+ WE +K P ++++R+  G+A
Sbjct: 600 GITRAQRELWFMICRERRQFGEVMRCEPSRFLMELPQDDLIWENRKPPQSEQQRVQSGRA 659

Query: 661 HIANLRAMFKK 671
           +IAN+R M KK
Sbjct: 660 NIANIRDMLKK 670