Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score =  358 bits (919), Expect = e-103
 Identities = 250/659 (37%), Positives = 353/659 (53%), Gaps = 42/659 (6%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LNP Q +AV       L+LAGAGSGKTRV+T +IA+L+         + AVTFTNKAA+E
Sbjct: 8   LNPEQLQAVTLPPQHALILAGAGSGKTRVLTTRIAWLISTGQMGPHAVLAVTFTNKAAKE 67

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELTE 122
           M  R++  L    +RG+ + TFH L   ++R   K  GL + F + D  DQL+ +K L +
Sbjct: 68  MLARLSAMLPIN-TRGMWIGTFHGLCNRLLRAHHKEAGLPSLFQILDSADQLSAIKRLLK 126

Query: 123 K-QLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNAL 181
              +D +K   R L+  I+  K+  L P QA+      ++ +    +  Y+ Q Q    +
Sbjct: 127 NLNVDDEKFPPRELMHFINAHKDQGLRPAQAEVWDDYTRRRV--ELWAEYEGQCQREGVV 184

Query: 182 DFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGR----- 236
           DF +L+L    LL  NE +R+ +Q R R++LVDE+QDTN  QY  +KLL G  G      
Sbjct: 185 DFAELLLRTYELLSRNEPLRRHYQERFRHILVDEFQDTNRLQYAWLKLLAGHDGSAGAPQ 244

Query: 237 ---LTVVGDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIAN 293
              +  VGDDDQSIY++RGA+  N+     +F    +I+LEQNYRS   IL AAN LI N
Sbjct: 245 GAAVFAVGDDDQSIYAFRGAEVGNMRDFEREFGVQNVIRLEQNYRSHGNILDAANALIKN 304

Query: 294 NPHVYQKALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDY-AILYRGN 352
           N     K L+++   GE ++V    ++  EA  ++ E  A + +     RD  A LYR N
Sbjct: 305 NQGRLGKNLWTDQGAGEPIRVFEGFSDLDEARWIVDE--ARELIREGISRDQIAFLYRSN 362

Query: 353 HQSRLIEKSLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKRE 412
            QSR++E  L    V YK+ GG  FF R EIK  +AYLR+L NPDDD AFLR+VN P R 
Sbjct: 363 AQSRVLEHELFTKGVAYKVYGGLRFFERQEIKHALAYLRLLANPDDDTAFLRVVNFPTRG 422

Query: 413 IGPATLEKLGSYANMRGKSLFTASFEL----GLEQHLSGRGLENLRRFTEWLVAIADNAE 468
           IG  +LE L   A+     L+ A+  L    G       R +E LRR TE L        
Sbjct: 423 IGARSLENLQEAAHRSNSPLYNAAASLTGKAGAAVGAFIRLIEELRRETENL-------- 474

Query: 469 RGNTVEAVRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLY----SWIVAD--LEGDNP 522
                  +  +V  I     L +     K  + R++N+ +L     S+I  +  +   +P
Sbjct: 475 ------PLPEVVEHIIERSGLRQHYLGEKEGQERLENLDELINAAASFIAEEGAMPVPDP 528

Query: 523 DQQEKTLKEVVQRLTLRDMMERGEE--NDDSDAVQLMTLHASKGLEFPYVYLIGAEEGIL 580
              +  L   +        +E G+    D  +AVQLMT+HA+KGLEF  V++ G E+G+ 
Sbjct: 529 ATPDAPLPSPLASFLAHASLEAGDHQAGDGQEAVQLMTVHAAKGLEFDVVFISGLEQGLF 588

Query: 581 PHQTSIDEEN-VEEERRLMYVGITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQD 638
           PH+ S+ E++  EEERRLMYV ITRA++ L     + R   G+      S FLDELPQ+
Sbjct: 589 PHENSVMEKSGEEEERRLMYVAITRARQRLYMSHAQTRMLHGQTRYCVPSAFLDELPQE 647