Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score =  631 bits (1628), Expect = 0.0
 Identities = 334/666 (50%), Positives = 446/666 (66%), Gaps = 12/666 (1%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LNP Q EA+ Y+ GP LVLAGAGSGKTRVIT KIAYL+Q+CG    NIAA+TFTNKAARE
Sbjct: 10  LNPPQREAIYYLDGPLLVLAGAGSGKTRVITQKIAYLIQECGMNPANIAAITFTNKAARE 69

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELTE 122
           M+ERV Q L  G + GL + TFH+LG+ I+R E KALG K  FS+FD  D  ++  +L+ 
Sbjct: 70  MQERVGQLLQGGSTAGLTICTFHSLGVRILREEAKALGYKPKFSIFDSTDCYSIFADLSA 129

Query: 123 KQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNALD 182
                DK  +R +   +S WKN M +P QA A AK E ++L A  +  Y   +++Y A+D
Sbjct: 130 SV---DKATIRSIQWLVSGWKNAMKSPDQAAAEAKSEIEVLAAKAYRDYAATLKAYQAVD 186

Query: 183 FDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVGD 242
           FDDLILLP+ L + + ++R +WQNR+RYLLVDEYQDTN  QY+L+KLL G R   T VGD
Sbjct: 187 FDDLILLPMQLFQEHPKIRDKWQNRLRYLLVDEYQDTNACQYQLLKLLTGPRAMFTAVGD 246

Query: 243 DDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKAL 302
           DDQ+IY WRGA  +NL  L  D+P+LKLI LEQNYRST+RIL+AAN +I NN  +++K L
Sbjct: 247 DDQAIYGWRGADVENLRGLPRDYPNLKLIMLEQNYRSTARILQAANNVIGNNEKLFEKKL 306

Query: 303 FSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEKSL 362
           +S+L  GE ++  +  + +HEAE V+ +++A KF  R+++ DYAILYR NHQ+RL E  L
Sbjct: 307 WSDLGHGEAIRGSVCRDNEHEAESVVMKLLADKFEKRSKFSDYAILYRSNHQARLFETHL 366

Query: 363 TQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEKLG 422
             NRVPY +SGGTSFF ++EIKD++AYLR+L N DDD AF+R V TPKR +G  TLE LG
Sbjct: 367 RNNRVPYVMSGGTSFFEKSEIKDVIAYLRLLANQDDDPAFIRAVTTPKRGVGGTTLEALG 426

Query: 423 SYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALVRD 482
           +YA  R  SLF A+FE G  Q +S R LE L +F E++  +   A R    E +  ++  
Sbjct: 427 TYAGERHISLFAAAFEEGFAQRVSHRQLEPLLQFCEFINRVEQRALREPAGEVLNDMLTA 486

Query: 483 IRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRDMM 542
           I YE WLY+   + +AA+ +  NV +   W+    E D     EKTL ++ Q + L +M+
Sbjct: 487 IGYEAWLYDHEET-RAADSKWGNVREFSQWLAGKGEKD-----EKTLIDLTQTIALINML 540

Query: 543 ERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYVGI 602
           ++  E+ + DAVQL TLHA+KGLE+  V+L+G EEGILPH +S++   VEEERRLMYVGI
Sbjct: 541 DKQNEDSEFDAVQLSTLHAAKGLEYKNVFLVGVEEGILPHSSSVESGTVEEERRLMYVGI 600

Query: 603 TRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQAHI 662
           TRA++ L    C++R+Q  E+     SRF+ E+  D     +       E   A  +A  
Sbjct: 601 TRARQHLHLSWCEKRKQGKEMYPCEPSRFIAEMGND---LRISGGKAAAEPDKATSKARF 657

Query: 663 ANLRAM 668
           ANLR M
Sbjct: 658 ANLRNM 663