Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 1101 a.a., Probable ATP-dependent DNA helicase from Mycobacterium tuberculosis H37Rv

 Score =  122 bits (306), Expect = 9e-32
 Identities = 166/733 (22%), Positives = 284/733 (38%), Gaps = 142/733 (19%)

Query: 16  GPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAAREMKERVAQTLGKGE 75
           GP +V+AGAG+GKT  +  ++ +LV     +   +  +TFT KAA ++  RV   L +  
Sbjct: 37  GPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLA 96

Query: 76  SRGL----------MVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL----- 120
             GL          +VST+H    +++R     L L+    L  + +   L  ++     
Sbjct: 97  GIGLGCGDPAACAPVVSTYHAFAGSLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYD 156

Query: 121 -----------------------------TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQ 151
                                        T    D   +L RL+ +  +        P Q
Sbjct: 157 GVLCTDKSPAAVTSIVVRLWGQLGEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQ 216

Query: 152 --AKAMAKGEQQLLFAHCFELYQKQMQSYNALDFDDLILLPVLLLRSNEEVRQRWQNRIR 209
              + +A   Q+       +   ++M +   +DF   +     L  ++ +V Q  + R R
Sbjct: 217 WLLRMLATQTQRAELVPLLDALGERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYR 276

Query: 210 YLLVDEYQDTNTSQYELVKLLVG----ERGRLTVVGDDDQSIYSWRGAKPQNLVLLGEDF 265
            +L+DEYQDT  +Q  ++  L G    +   LT VGD  QSIY WRGA   NL     DF
Sbjct: 277 VVLLDEYQDTGHAQRVVLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDF 336

Query: 266 P-----SLKLIKLEQNYRSTSRILRAANILI--ANNPHVYQKALFSELAEGEKLKVILAN 318
           P        +++L  ++R+  + LR AN +   A    V  +AL     +     V  A 
Sbjct: 337 PLSDGTPAPVLELLTSWRNPPQALRVANGISAEARRRSVAVRAL-RPRPDAPPGAVRCAL 395

Query: 319 NEDHEAERV-IAEIIAHKF----LNRTEYRDYAILYRGNHQSRLIEKSLTQNRVPYKLSG 373
             D +AER  IA+ +  ++     +  +    A+L R N  +  I  +L    +P ++ G
Sbjct: 396 LPDVQAEREWIADHLRMRYQRAEADGVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVG 455

Query: 374 GTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEKLGSYA-NMRGKSL 432
                +  E+ +++A LR++ +P    A +R++  P+  +G   L  L   A  + G+S 
Sbjct: 456 LAGLLSIPEVAEVVAMLRLVADPTAGAAAMRVLTGPRWRLGARDLAALWRRALTLSGESP 515

Query: 433 FTASFEL---------------------GLEQHLSGRGLENLRRFTEWLVAIADNAERGN 471
            TAS E                      G  +  S  G   +      L A+      G+
Sbjct: 516 STASPESIAMAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSAL--RGRLGH 573

Query: 472 TVEAVRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKE 531
           ++  + A VR +   D     SA         +++      +    E  +    E ++  
Sbjct: 574 SLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAG 633

Query: 532 VVQRLTLRDMMERG----EENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILP------ 581
           ++  L + +++E G    E     D VQ++T+HA+KGLE+  V +     G+ P      
Sbjct: 634 LLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRS 693

Query: 582 ---------------------------------------------HQTSIDEENVEEERR 596
                                                        H+  +D   V+EERR
Sbjct: 694 SWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEERR 753

Query: 597 LMYVGITRAQREL 609
           L+YV +TRA+  L
Sbjct: 754 LLYVAVTRAEDTL 766