Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  160 bits (406), Expect = 2e-43
 Identities = 160/652 (24%), Positives = 289/652 (44%), Gaps = 71/652 (10%)

Query: 19  LVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAAREMKERVAQTLGKGESRG 78
           ++ A AGSGKT  +  +I YL++Q G+    +  + F   A  + + ++ +   +     
Sbjct: 49  VITAVAGSGKTSTLAWRIRYLLEQ-GHDPDRMLVLMFNRSARVDFERKLQEVCARSGLAL 107

Query: 79  LMVSTFHTLGLNIIRREFKALGLKAGFS--LFDDQDQLALLKELTEKQLDGD-------- 128
             + T+H +GL + +R F   G   GFS  +  +Q+      +LT +    D        
Sbjct: 108 PEIRTYHAMGLRLYKR-FVREGYLPGFSDKILTEQEISFQAWQLTRRLAPEDLADEIRRN 166

Query: 129 -KDLLRLLLSTISNWKNDMLTPPQA--KAMAKGEQQLLFAHCFELYQKQMQSYNALDFDD 185
            KD +      I   K   L+P +   + +   ++       F  +++  +S   + + D
Sbjct: 167 KKDFVETATGFIDLVKTT-LSPAEIVFEELGYSDKHKYLIDLFHSFEQWRKSQGRISYAD 225

Query: 186 LILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVGDDDQ 245
           ++  PV+ +  N  +++   N++  +LVDEYQDTN  Q+ L++ + G+R R+TVVGD DQ
Sbjct: 226 MLYEPVMAIHQNPPLQRLVGNKMDLILVDEYQDTNEIQHLLLRYVAGDRARVTVVGDPDQ 285

Query: 246 SIYSWRGAKPQNLV-LLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKALFS 304
           +IY +RGAKP+ ++    ++F S     L   +R   R+   AN LI +N    +K +  
Sbjct: 286 TIYEFRGAKPEFILKRFSDEFESPLEQTLSYTFRYGHRVALLANHLICHN--TGRKDVLC 343

Query: 305 ELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEKSLTQ 364
                     I  +  + +A+ V+  +      +       AIL+R   QS  IE  L  
Sbjct: 344 HSHASTPGTEITLHRSESDADTVLQILQGQ---SEPALAGTAILFRVWSQSVPIELKLLA 400

Query: 365 NRVPYKLSGGTSFFARAEIKDIMAYLRVLVN-----PDDDNAFL--RIVNTPKREIGPAT 417
            ++PY++  G       E++ I A L V+       PD+D   L  +++  P   +    
Sbjct: 401 RQIPYRIDAGKGALFSREVQAITALLMVVTGKLENLPDEDRLELARQLLRFPHVGLKEPE 460

Query: 418 LEKLGSYANMRGKSLFTASFELGLEQHLSGRGLE--------NLRRFTEWLVAIADNAER 469
           LE+L         + F A F  G  + L     +         LR+  E L  +  ++  
Sbjct: 461 LEQL---------ARFLAGFSSGWHERLLAMDFDALAPMAARKLRKLGEVLAQL--HSYG 509

Query: 470 GNTVEAVRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVA-DLEGDNPDQQEKT 528
           G     +          + +   + + ++AE R+  +     ++ + D+  +   +  KT
Sbjct: 510 GPVAGLISVYAEHTDLYEGIRSLALTHESAEERIDTIQGFRQYLKSLDVTAEGALEHLKT 569

Query: 529 LKEVVQRLTLRDMMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDE 588
           LK+           + GE+      V L T+H +KGLE+P V + G +E  LP+     +
Sbjct: 570 LKQ-----------QAGEK--QQGGVLLSTIHRTKGLEWPTVIIPGLQEKYLPYSPRPQD 616

Query: 589 EN---VEEERRLMYVGITRAQRELTFI---VCKERRQFGELIKPSQSRFLDE 634
                +E ERRL+YV +TR +++L  I     K+    G+L     SRF++E
Sbjct: 617 NARAFLESERRLLYVAMTRTRQQLHLITRPASKQPHLDGDL---GPSRFVEE 665