Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., UvrD/REP helicase from Marinobacter adhaerens HP15

 Score =  383 bits (984), Expect = e-110
 Identities = 245/651 (37%), Positives = 365/651 (56%), Gaps = 12/651 (1%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LN  Q EAV   +   LVLAGAGSGKTRV+ ++IA+L+         I AVTFTNKAA+E
Sbjct: 10  LNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAVTFTNKAAKE 69

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKE-LT 121
           M+ R+ Q +    +RGL   TFH +   ++R  +K  GL   F + D  DQL L+K  + 
Sbjct: 70  MRYRIEQMMDI-PARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQLRLIKRVMR 128

Query: 122 EKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNAL 181
           E Q+D  K   +     IS+ K++ L     +         +    +  Y+K  Q    +
Sbjct: 129 ENQIDESKWPPKQAQWFISSQKDEGLRVDHIQENPGDHFLSIMLKIYRQYEKLCQQGGLV 188

Query: 182 DFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVG 241
           DF +L+L    L     E+   +Q+R +++LVDE+QDTNT QY  +++L   R  +TVVG
Sbjct: 189 DFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASNRVPMTVVG 248

Query: 242 DDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKA 301
           DDDQSIY WRGAK +N+     DFP+ +L++LEQNYRST  IL+AAN +IANN     K 
Sbjct: 249 DDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIANNQGRLGKE 308

Query: 302 LFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEKS 361
           L+++  EGE + +  A NE  EA   IA+ I+    +     + AILYR N QSR++E+S
Sbjct: 309 LWTDGPEGEPISLYAAFNEQDEA-NYIADSISAWVQDGNLRSESAILYRSNAQSRVLEES 367

Query: 362 LTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEKL 421
           L +  +PY++ GG  F+ R EI++ +AYLR++    DD AF R+VN P R IG  +L +L
Sbjct: 368 LMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIGAKSLAEL 427

Query: 422 GSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALVR 481
             YA  +  SL+ ++  L     + GR    L+ F   +  +++     +    ++  + 
Sbjct: 428 REYATEQSISLWESAERLLDAGQVKGRAKTGLQSFIAIIEGLSEMVGDASLHGLMKQTIE 487

Query: 482 DIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRDM 541
           +   +D  Y  S   +  + R++N+ +L    V  L     +     L E + +  L D 
Sbjct: 488 NSGLKD--YHASEKGEKGQARVENLEEL----VNALSDYEVEDGVDALSEFIAQAAL-DA 540

Query: 542 MERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEE-NVEEERRLMYV 600
            E  +  D  D+VQLMTLH++KGLEFP V+L G EEG+ PH  S++E   +EEERRL YV
Sbjct: 541 GE-SQAGDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERRLAYV 599

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQ 651
           GITRA ++L     + RR +G+    + SRF+ E+P D ++    +  VT+
Sbjct: 600 GITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTR 650