Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., DNA helicase, ATP-dependent, RepA type from Marinobacter adhaerens HP15

 Score =  724 bits (1869), Expect = 0.0
 Identities = 363/665 (54%), Positives = 483/665 (72%), Gaps = 2/665 (0%)

Query: 2   KLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAAR 61
           KLNPRQ EAV+Y  GP LVLAGAGSGKT VIT KIAYL++Q G   R+IAAVTFTNKAAR
Sbjct: 3   KLNPRQSEAVRYADGPMLVLAGAGSGKTSVITRKIAYLIEQLGIPGRHIAAVTFTNKAAR 62

Query: 62  EMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELT 121
           EMKERV + + +  +RGL+VSTFH LGLN+IR E   LG   GFS+FD +D  ALL++L 
Sbjct: 63  EMKERVGRIVDRKLTRGLIVSTFHNLGLNMIREEHTHLGYHPGFSIFDAEDAKALLQDLM 122

Query: 122 EKQLDGDK-DLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
            ++   +  D L  +  TIS+WKN M  P +A + A  E++   A  ++ Y + +++YNA
Sbjct: 123 LREASAEAGDELNDIQMTISSWKNAMRGPAEALSKAADEREQRIAIIYKKYNEYLKAYNA 182

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           +DFDDLILLPV+L RSN +V  +W+ +IRY+LVDEYQDTN  QYELVK LV ER   TVV
Sbjct: 183 VDFDDLILLPVMLFRSNPDVLAKWRRKIRYMLVDEYQDTNVCQYELVKQLVAERAAFTVV 242

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIY+WRGA+P+NL  L EDFPSLK++KLEQNYRST+RILR+AN +IANNPHV++K
Sbjct: 243 GDDDQSIYAWRGARPENLAQLKEDFPSLKIVKLEQNYRSTARILRSANTVIANNPHVFEK 302

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
           AL+S+   GE+++++   NED E +RV  EI+  K     ++RD+A+LYRGNHQ+RL+E 
Sbjct: 303 ALWSDHTIGEEIRIVRCRNEDAETDRVATEILDQKLKKGLDFRDFAVLYRGNHQARLLEM 362

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
            L   ++PY++SGG SFF++ EIKD M+YLR+L+NPDDD AFLR+VN P+REIGP TLE+
Sbjct: 363 KLQAYQIPYRISGGQSFFSKNEIKDAMSYLRLLINPDDDAAFLRVVNVPRREIGPRTLEQ 422

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           L  YA  R  SLF A  ++G E H++ +GL+ LRRF  W+ A  +     N +  ++ L 
Sbjct: 423 LSHYARSRNVSLFKALGDMGAETHVTEKGLDRLRRFAHWVDATCERLHSENPIPVIKQLF 482

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
            DI YE+WL++ S +PK AE RM+N+  L   I   L+       E  +++ + +L LRD
Sbjct: 483 TDIEYEEWLHQHSGTPKQAERRMENIWYLVESIQRMLDDGKGTADELGIEDAITKLILRD 542

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MME+ EE+DDSD VQL+TLHASKGLEFP+V+++G EE ILPH++SI+E N+EEERRLMYV
Sbjct: 543 MMEQREEDDDSDKVQLLTLHASKGLEFPHVFIMGLEEEILPHRSSIEEGNIEEERRLMYV 602

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRA+  LT      R+Q+GE ++   SRFLDELP++D++WE     +  E    KG+A
Sbjct: 603 GITRARETLTLTYAATRKQYGEKLETIPSRFLDELPEEDLKWE-GTGDLDVEANQKKGKA 661

Query: 661 HIANL 665
            ++ L
Sbjct: 662 TLSAL 666