Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  249 bits (637), Expect = 7e-71
 Identities = 142/380 (37%), Positives = 224/380 (58%), Gaps = 19/380 (5%)

Query: 1   MKKWTFFML--LIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVI 58
           M +   FML  ++ ++   + + FN   QQ I ++ A  P+P   V    A  +DW   +
Sbjct: 1   MLRRMLFMLGAVVVVVAILAALKFNSIYQQ-IQQFQA--PKPAIDVETELARRMDWQSRL 57

Query: 59  EAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPA 118
            AIG +  +QG+ L+ E AG I  + F+SG +V+K QP+VLLDS +ERA+L S EA L  
Sbjct: 58  PAIGTLRASQGIDLSVEIAGTITDVQFQSGEKVSKGQPIVLLDSEMERASLASAEADLNL 117

Query: 119 AKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRN 178
           ++ +++R + L  + +IS+  YD   A      A +  L+A++A++ I APFAG IGIR 
Sbjct: 118 SRVEFQRARSLLDRQAISRSEYDRLNAESQKAEASVAQLRASLAKKRILAPFAGTIGIRQ 177

Query: 179 VFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISA 238
           V +G Y+  GT I  L+D S + + F + ++ +  ++L Q+V + V AYP   F+G I+A
Sbjct: 178 VDVGDYIAAGTPIATLQDLSTLYVDFFLAEQHVPLLALGQKVQLRVAAYPDQRFEGVITA 237

Query: 239 IEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNV 298
           + P V   +  +QV+A++ N DG+L  GMFA   ++LP    QV +P+TAITYTLYG++V
Sbjct: 238 LNPKVETTTRNVQVRAELANPDGRLLPGMFADLQVLLPTETAQVVVPETAITYTLYGNSV 297

Query: 299 YIVSEENGEKR---------VQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGA 349
            +V+E    +          V++  V  GER + +  ILEG++ G+ V+T GQ++L +GA
Sbjct: 298 LLVTEGTPPEGVTTDEPYLVVERRFVTTGERRDGVTVILEGLEGGEQVITAGQLKLDSGA 357

Query: 350 KVRIVES-----DATTPPAE 364
            V I E+     D T P +E
Sbjct: 358 HVAIAENRTLKLDGTEPASE 377