Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., efflux RND transporter periplasmic adaptor subunit from Synechocystis sp000284455 PCC 6803

 Score =  100 bits (250), Expect = 7e-26
 Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 8/231 (3%)

Query: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDT 197
           E+  +A A      A +++L+A + + EI APFAGV+G   V LG Y+Q   D+  L + 
Sbjct: 290 ETIAQARARVGQALASVKTLQARLDKSEITAPFAGVVGYIPVKLGDYVQANDDLTNLTEN 349

Query: 198 SVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQVQADIP 257
             + L   VP     R+     V+I +D   +   +G IS + P V      + V+A   
Sbjct: 350 QQLDLNLAVPLAQAPRLRPGLVVEI-LDGQEKAIARGQISFVSPDVDNDGQSVLVRATFS 408

Query: 258 NSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKR------VQ 311
           N + KL +G   +A II  + +  + +P  A+T       VY+V ++  E+        Q
Sbjct: 409 NENQKLLNGQLVQARIIWQQ-DTGLVVPTVAVTRIGGESFVYVVQDKENEQTGEAALVAQ 467

Query: 312 QHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVESDATTPP 362
           Q  V +G    S   IL G++PGD V+T G +R+ +GA ++   ++ +  P
Sbjct: 468 QKSVNLGSIQGSNYQILSGLEPGDRVITAGLLRVQDGAPIQPAPTEGSANP 518