Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  119 bits (297), Expect = 2e-31
 Identities = 83/301 (27%), Positives = 147/301 (48%), Gaps = 5/301 (1%)

Query: 58  IEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLP 117
           + AIG  E  + VT+T    G + +I  +SG ++ + Q +  LDS  +    +       
Sbjct: 91  LNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRITEGQVIARLDSDDQMIAAEQARLTRD 150

Query: 118 AAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIR 177
           +A+ K ERY+ L    +++     ++E +  A    +++ +  + RR+I AP  GV+GI 
Sbjct: 151 SAREKVERYRNLSTARAVTAVEVRDSEIALQAAELALKTAELDLKRRDIVAPSKGVVGII 210

Query: 178 NVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSIS 237
            V +G Y+   T I  ++D S + + F VP+R   +IS+DQ V     A P  + +G + 
Sbjct: 211 TVNIGDYVTTSTPIAVVDDRSQILVDFWVPERFAGKISVDQPVTASAIAQPGRALQGVVH 270

Query: 238 AIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDN 297
           AI+  +  +S  ++V+A + N D  LR+GM     +     +   T+   AI ++  G  
Sbjct: 271 AIDNRLDPESRTLRVRARLENPDDMLRAGMSFSVTVAFDG-DRYPTVDPLAIQWSSEGSF 329

Query: 298 VYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVESD 357
           ++ V  +  E+      +K+ +R+     +   +  GD VVT G  RL +G  VRI    
Sbjct: 330 IWRVKGDKSER----VPIKIIQRNPDKVLVDAELAEGDRVVTEGVQRLRDGGVVRIAGEP 385

Query: 358 A 358
           A
Sbjct: 386 A 386