Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., HlyD family secretion protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  120 bits (300), Expect = 7e-32
 Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 4/283 (1%)

Query: 72  LTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFA 131
           + T  AG+I+ +  E G +V + Q L ++D+  ++  L  +EA +   + +  R K + +
Sbjct: 66  VVTRIAGLIEALHVEEGDRVKQGQLLAVIDAKRQQYELDRSEAEVLIIEQELARVKKMKS 125

Query: 132 KGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDI 191
           K  +S +S  + E +  A  A ++  K  +   +I +P  G+I  R V  G   +   ++
Sbjct: 126 KDYVSADSIAKLEYNLQAAKARLDLAKLQVKESQIVSPVDGIIAKRFVKAGNMAKEFEEL 185

Query: 192 VRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQ 251
             + +   +     +P++ +S + L Q  DI+       +    +  I P V  QSG  +
Sbjct: 186 FYVVNQDELHGIVHLPEQQLSSLRLGQHADIYASGQKNQAVNAEVLRISPVVDAQSGTFK 245

Query: 252 VQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQ 311
           V   +PN +G L+SGMF R  +     EN +T+P  AI        +Y+V +   E+R  
Sbjct: 246 VTLKVPNQNGILKSGMFTRVELKYDTHENVITVPYNAIINQDNKQTLYVVQDTTAERR-- 303

Query: 312 QHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIV 354
              V++G R  ++  ++ G+ PG+ +V  GQ  L + + V I+
Sbjct: 304 --EVELGYREGNMVEVVAGIAPGEHLVIRGQQNLKDQSLVEII 344